Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2388 ATGGCACCTCCTCACAAGCTCAATTCTCCCACGGGAAATTCGAGTGTGACGTCGCAGGCTGAGAATGGTTTTATAAGTTCATATTCTCCATTTTCTGAGAAAGCAGTGCAAGAGCTTCTTCAATTACCAATCCAGGGTTCTGATGACCATCTTATAGAGTTCTCTGAATCTTTAAGAACCGTCGCGAAGACCCTTAGGAAAGTTGCTGAAGGAAAAGCTGCTGCTCAAGCTGAGGCTGCTGAATGGAAACGTAAATATGAGTTGGAGCGGACACGGAATCTGCAGATCGAAAATAAAGGAAAATCATGCCTTGAGCATCGGGCTGATCTGGATGACGTGAAGACAAATAACTCCGCCAAACAAACTACATTATATAAAGTTGAAGCTAACGGGAAGTCTGAAGAATGTTATTCAAGGAATGGTATTTGTTCCCATGACGTCCTTAGGGATGGGAACCCTCATTCTGATTCCAAGATGCTCAGAAAGGCTTCTTTTAAACTTCAATGGTGCTGCAAAGGCGAGCAAAGTGATCAGCACAAGCATGACATTGTCTCTTTTGAAAGAGGAAACATAACCACAGCAGAGCGCAGTAGTAAGCAGATCTCTTTGAAATGGGAGTCATCCCCACAGACGGTGCTCATATTGACCAAACCAAATTCGGATTCAGTTAAAATTCTGTGTGCTGAAATGATTAGATGGTTGAGGCAGCATAAGAAACTACAAGTATATGTGGAACCACGTGTCAAGGTCGACCTTCTTGAGGAGTCATCATACTTTAACTTTGTAGAAACATGGAGTGATGATAAGGAAATATTGAGGCTGCACACTAAAGTTGACCTTGTGATAACTCTTGGAGGAGATGGCACTGTCCTATGGACAGCGTCTATGTTCAAAGGACCAGTGCCTCCTATTGTCCCCTTTTCTTTAGGGTCTCTTGGATTTATGACTCCTTTCTATAGTGAAAATTACAAAGAGTGCCTTGAATCAATTTTAAAAGGCCCCATTAGTATTACATTACGGCACCGTTTGATATGTCATGTTATACGAGATGCAGCTAAAAATGAATTTGAAACTGAAGAACCTATACTTGTTCTAAACGAGGTTACTATTGATCGTGGTATATCATCTTATCTCACAAATTTGGAATGTTACTGTGACAACTCCTTTGTCACACGTGTGCAAGGGGATGGATTAATTTTATCTACAACATCCGGCAGTACTGCATATTCTTTGGCAGCTGGAGGATCAATGGTCCATCCTCAGGTTCCGGGTATTTTGTTTACGCCAATTTGCCCACATTCCCTATCTTTTAGGCCACTGATATTGCCAGAGCATGTGACTTTACGGGTGCAAATACCATTCAATAGCAGAGGATCTGCATGGGCGTCATTTGACGGCAAAGACAGGAAACAGTTAGCACCAGGAGATGCATTGGTTTGCAGCATGGCACCCTGGCCTGTTCCTACAGCTTGTCATGGAGATTCTACTAGTGACTTCTTGCACAGCATTCATGAGGGTCTTCATTGGAATTTGAGAAAGACGCAGTCATCTGATGCTCCCCGTGAAGCATGA 1572 0.4281 MAPPHKLNSPTGNSSVTSQAENGFISSYSPFSEKAVQELLQLPIQGSDDHLIEFSESLRTVAKTLRKVAEGKAAAQAEAAEWKRKYELERTRNLQIENKGKSCLEHRADLDDVKTNNSAKQTTLYKVEANGKSEECYSRNGICSHDVLRDGNPHSDSKMLRKASFKLQWCCKGEQSDQHKHDIVSFERGNITTAERSSKQISLKWESSPQTVLILTKPNSDSVKILCAEMIRWLRQHKKLQVYVEPRVKVDLLEESSYFNFVETWSDDKEILRLHTKVDLVITLGGDGTVLWTASMFKGPVPPIVPFSLGSLGFMTPFYSENYKECLESILKGPISITLRHRLICHVIRDAAKNEFETEEPILVLNEVTIDRGISSYLTNLECYCDNSFVTRVQGDGLILSTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLILPEHVTLRVQIPFNSRGSAWASFDGKDRKQLAPGDALVCSMAPWPVPTACHGDSTSDFLHSIHEGLHWNLRKTQSSDAPREA* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2388 523 Pfam ATP-NAD kinase N-terminal domain 212 333 IPR002504 GO:0003951|GO:0006741
Mtr4g2388 523 Hamap NAD kinase [nadK]. 210 509 IPR002504 GO:0003951|GO:0006741
Mtr4g2388 523 Gene3D - 342 485 IPR017437 GO:0003951|GO:0019674
Mtr4g2388 523 Coils Coil 72 92 - -
Mtr4g2388 523 Pfam ATP-NAD kinase C-terminal domain 365 482 - -
Mtr4g2388 523 PANTHER NAD KINASE 1-RELATED 4 522 - -
Mtr4g2388 523 Gene3D - 199 510 IPR017438 -
Mtr4g2388 523 PANTHER NAD KINASE 4 522 - -
Mtr4g2388 523 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 211 515 IPR016064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2388 Mtr-Chr4 37468993 37475405 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2388 K00858 - gmx:100806276 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2388 4 37468993 37475405 Mtr4g2388 4 37468993 37475405 ECH