Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2387 ATGGATACACTTCAAGCCACATACAAAGACGAAGAAGAAGATGAAGAAATGATTGATCCTTCAACCGTCACAACAACAACCGGACCCTCCGTCGAACCACCCGCTGCCTCCACCGTGGTTGAAATGGAATTAATAGAGGCGCCTCCTGTTACTACCACTACTCCCTCCAATGACGGAAAATCTGAACTCGATCCCTCCGATGAACCCTCCGACGACTCTGCCGAACAGAAGAATTCACCGAAACAGAAAAGAGAACAACCTGATGAAGATGAAGAAGAACCGCTTCCGAAGAAGCAGAAGCAACTTTCCTCTCTGAACCCCGTTAAGGAAGAACCAATTTCATTGCCGGAGGTTAACAATGCTGCTGCTGCTGTGCCAATTCCGACTACAACAACACCGGTGAATGGAACAGCGACGACGAAGAAAACTAAGAAAAAGAATAACAATGTATGGGCAACGAAATCGAAGAAAAAATCGAAGAAAAACAAAAACAACAACAACACAAACACCAACAATAACAACCACACGAACGGTGGAGAAGATAGTGTTCTGATAACACCAGTACAAAGGTTTCCTGATAAAAGCGATGATACACCGGAGATGAAGATATGTTTATCGAAAGTTTACAAAGCGGAGAAAGTTGAGTTGAGTGAGGATAGGTTAAGTGCTGGGAGCACAAAGGGGTATAGAATGGTTAGGGCAACAAGAGGGGTAGTGGAAGGAGCTTGGTATTTTGAGATAAAGGTAGTGAGGTTAGGGGAGAGTGGACATACGCGGTTGGGTTGGACAATGGAGAAGGGTGATTTGCAGGCACCTGTTGGGTATGATGGGAATAGTTTTGGATATAGGGATATTGATGGGAGTAAGATTCATAAGGCTTTGAGGGAGAATTATGGGGATGAGGGTTATGGTGAAGGTGATGTTATTGGGTTTTATATTAATTTGCCTGATGGAGATAAGTTTGCGCCGAAAAATCAGAATTTGGTTTGGTATAAAGGACAACGGTATGCTTATAATCCAGATGCCAAGGAAGATCCACCTGAAGTTGTGCCTGGAAGTGAGATATCTTTCTTCAAAAATGGTGTATGTCAAGGTGTAGCTTTCAAAGACCTCTTTGGTGGTCGTTACTATCCTGCTGCTTCAATGTATACTCTTCCCCATGAACAAAACTGCACAGTAAAGTTCAACTTTGGTCCGGACTTCGAATTTTTTCCTCATGATTTCAATGAACGGCCAATTCCCAAGCCAATGGTTGAAGTTCCTCATCATGGTTTTGAAAATCAAGTTGAAAATGGGGCATTGACTGAGAAGAAATCTAATGGAGAGTTGAATGAGAGTAAATCAAATGGAGAGTCGACTGTGAAGAAATCAACAGGAGAGTCGACTGAGAAGAAATCAAATGGAGAGTCGACTGAGAAGAAATCAAATGGAGAGTCATACGAGCAGAAATCAAATGGAGAGTCGAAGGAGAAGAAATCAGATGAAGAGGCAGAGAAGAAATCAGATGAAGAGGCAAAGGAGAAGAAATCAGATGAAGAGGCGAGGGAGAAGAAATCAGATGAAGAGTCAAACGAGAAGAAATCAGATGAAGAGGTGGAAGAGAATAAATCTTAA 1614 0.425 MDTLQATYKDEEEDEEMIDPSTVTTTTGPSVEPPAASTVVEMELIEAPPVTTTTPSNDGKSELDPSDEPSDDSAEQKNSPKQKREQPDEDEEEPLPKKQKQLSSLNPVKEEPISLPEVNNAAAAVPIPTTTTPVNGTATTKKTKKKNNNVWATKSKKKSKKNKNNNNTNTNNNNHTNGGEDSVLITPVQRFPDKSDDTPEMKICLSKVYKAEKVELSEDRLSAGSTKGYRMVRATRGVVEGAWYFEIKVVRLGESGHTRLGWTMEKGDLQAPVGYDGNSFGYRDIDGSKIHKALRENYGDEGYGEGDVIGFYINLPDGDKFAPKNQNLVWYKGQRYAYNPDAKEDPPEVVPGSEISFFKNGVCQGVAFKDLFGGRYYPAASMYTLPHEQNCTVKFNFGPDFEFFPHDFNERPIPKPMVEVPHHGFENQVENGALTEKKSNGELNESKSNGESTVKKSTGESTEKKSNGESTEKKSNGESYEQKSNGESKEKKSDEEAEKKSDEEAKEKKSDEEAREKKSDEESNEKKSDEEVEENKS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2387 537 SUPERFAMILY Concanavalin A-like lectins/glucanases 202 405 IPR013320 -
Mtr4g2387 537 Coils Coil 492 512 - -
Mtr4g2387 537 Pfam SPRY domain 243 318 IPR003877 GO:0005515
Mtr4g2387 537 Gene3D - 201 416 IPR043136 -
Mtr4g2387 537 MobiDBLite consensus disorder prediction 61 98 - -
Mtr4g2387 537 CDD SPRY_Ash2 214 401 - -
Mtr4g2387 537 MobiDBLite consensus disorder prediction 147 163 - -
Mtr4g2387 537 MobiDBLite consensus disorder prediction 457 537 - -
Mtr4g2387 537 MobiDBLite consensus disorder prediction 124 146 - -
Mtr4g2387 537 ProSiteProfiles B30.2/SPRY domain profile. 183 402 IPR001870 -
Mtr4g2387 537 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 52 440 IPR037353 GO:0048188|GO:0051568
Mtr4g2387 537 MobiDBLite consensus disorder prediction 432 456 - -
Mtr4g2387 537 MobiDBLite consensus disorder prediction 1 182 - -
Mtr4g2387 537 MobiDBLite consensus disorder prediction 432 537 - -
Mtr4g2387 537 SMART SPRY_3 240 401 IPR003877 GO:0005515
Mtr4g2387 537 MobiDBLite consensus disorder prediction 164 182 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2387 K14964 - gmx:100816796 540.036
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2387 4 37459912 37464397 Mtr4g2387 4 37459912 37464397 ECH