Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2381 ATGGAAGACGTTTGCGAAAGCAAAGACTTCGCATTCGCAAAGCAAGAAGAAGCAATCCTCTCATTCTGGTCAAACATCGATGCATTCCACACACAACTCTCACGAACCAAAGACAAACCCGAATACATCTTCTACGACGGTCCACCCTTCGCCACCGGTCTCCCTCACTACGGCCACATCCTTGCCGGTACTATCAAAGACATCGTCACGCGCTACCAGTCCATGACCGGTCACCATGTCACGCGCCGATTCGGTTGGGATTGTCATGGTTTACCGGTCGAAAACGAGATCGATAAGAAATTAGGGATTAAGAAGAGGGAAGATGTGCTTAAGTTAGGGATTGGGGTTTATAATGAAGAGTGTAGGAGTATTGTTACGAGATATGTTGAAGAATGGGAGAATGTGATTACTAGGACTGGGAGATGGATTGATTTTAAGAACGATTATAAGACTATGGATTTGAATTTTATGGAATCAGTGTGGTGGGTTTTTGGCCAGCTTTATGCTAAGGATCTTGTTTACAAGGGTTTCAAGGTTATGCCATATAGTACTGGTTGTAAAACCCCGCTGTCTAATTTTGAGGCTGGTCAGAATTATAAGGATGTATCTGATCCTGAAGTGTACATGGCATTTCCGGTGTTGGGCGATCAACATGGTGCATCTTTTGTGGCTTGGACCACAACACCATGGACTCTTCCTAGCAACCTTGCTTTGTGTGTCAATGCCAATTTTACCTATTTGAAGGTACGCAACAAGTATACGGGTAAAGTTTACATAGTTGCTGAATCTCGTCTGTCTACACTCTATAACCCAAAGGATAAACCCAAAGAGGCTGTTGCTAATAGCTCAGTTAGTGTCCCTAAAAATGCAAAGACCAAGGGAACTTCAAGTGGAAAGACAGATAATGTATTAGATTCTTTTGATGTGCTGGAGAAATTCTCAGGGGCTTCATTAGTGGGGATGAAGTATGAACCATTATTTGATTACTTTACAGAGTTATCTGATACGGCTTTTAGAGTTGTTGCCGACAATTATGTAACTGATGATAGTGGTACTGGCATTGTCCATTGTGCCCCTGCTTTTGGTGAAGATGATTTTCGTGTTTGCATTGACAATCAAATTCTTACCAAGGATAAACTTGTTGTAGCTGTTGACGATGATGGCTGCTTTACTGAAAAAATTACCGACTTCAGTGGGTGCTATATCAAACAAGCCGACAAGGATATCATTGAAGCAGTGAAGGCAAAGGGTAGGCTAGTTAAGTCTGGAGCTTTTACACATTCTTATCCATACTGTTGGAGATCTGATACCCCACTCATTTACAGAGCTGTTCCAAGCTGGTTTGTTAAAGTGGAGTCGCTGAAAGAGAAATTGTTGGAAAACAATAAACAGACGTACTGGGTCCCTGATTTTGTCAAGGATAAGCGATTTCACAATTGGCTGGAAAATGCAAGAGATTGGGCAATTAGTCGAAGTAGATTTTGGGGGACCCCTCTCCCTTTATGGATTAGTGAGGATGAGCAAGTAATAGTTGTCATAGATTCTGTTGCAAAACTTGAAAAGCTTTCAGGTGTAAAGGTGACTGACCTTCATCGGCACAACATTGATCATATTACAATTCAGCATGAAAGTGGCCGTGTGCTTCGACGCGTTGATGATGTTTTCGACTGCTGGTTCGAAAGTGGGTCCATGCCTTATGCGTATATCCATTATCCTTTTGAAAATGTTGAGCTGTTTGAGAAGAATTTTCCTGGCCATTTTGTTGCTGAAGGACTGGATCAAACCCGTGGTTGGTTTTATACCCTAATGGTGCTAGCTACTGCATTATTTGGTAAGCCTGCCTTTAGGAATCTAATTTGCAATGGGCTTGTCCTGGCTGAAGATGGGAAAAAGATGAGCAAAAGCCTGAAAAACTATCCTTCACCAATGGCCGTTATTGATGATTATGGAGCGGATGCCCTGCGATTGTACCTTATAAACTCTCCTGTCGTGCGTGCTGAGCCACTTCGCTTCAAGAAGGAAGGAGTTTATGGTGTTGTTAGGGATGTTTTCCTTCCCTGGTATAATGCATATAGGTTCCTTGTTCAAAATACAAAGAGGCTTGAGGTTGAGGGTCTAGCACCTTTTGTACTCCTTGATCAGGCCACACTGAAGTCATCAAATGTTCTTGATCAGTGGATAAACTCTGCAACCCAGAGCCTGGTTCATTTTGTCCGGAAAGAAATGGATGCTTACCGCCTTTATACGGTGGTTCCGTATCTTCTAAAATTTCTTGATAACCTTACAAATATTTATGTACGGCTCAACCGTAAGAGACTGAAAGGTCGTACTGGAGAAGAAGACTGTAGGACAGCACTTTCAACTCTATATAATGTGCTTTTGTTATCTTGTAAAGTGATGGCTCCTTTTACACCGTTCTTTACTGAGGTACTGTATCAAAATATGCGAAAAGCTTGTAATGGATCAGAGGAGAGCATACACTATTGCAGTTTTCCTGAGGAAGAAGGCAAGGGGGGAGAACGGATTGAGCAAAGTGTCTTAAGGATGATGACAATAATTGATCTGGCCCGAAACATTCGTGAGCGTCATAACAAGCCTCTTAAAACACCACTCAGGGAGATGGTGATAGTGCATCCTGATAAAGACTTCCTTGCTGACATTAATGGAAAGTTGAAGGAGTATGTACTTGAGGAGCTCAATATACGATCCCTTGATCCATGTAATGATACGTTAAAGTATGCATCCTTACGTGCTGAGCCTGACTTTAGTGTGTTAGGCAAGAGGCTAGGAAAATCTATGGGCATTGTTGCCAAAGAAGTCAAAGCAATGTCACAGGAAAGTATTTTGGCTTTTGAAAGTGCTGGAGAAGTCGTCATTGCAAATCAATGTTTGAAGCGGTCTGATATTAAGGTTCTCCGTGATTTTAAACGCCCTGATGGTAAGACTGAGACGGAGATTGATGCTGCTGGAGATGGTGATGTTTTGGTTATATTGGACTTGCAACATGACGAGTCATTGTTTGAGGCTGGTACTGCGAGAGAGATTGTTAACAGAATTCAGAAGTTAAGAAAGAAAGTTGCTCTTGAGCCAACTGACACAGTTGAGGTTTACTTTCAATCATTGGATGATGATGCATCAATCTCTCTGGGGGTTTTGCGTTCGCAGGAATCCTATATCAGAGAGGCTATTGGTTCTACGTTGCTTCAATTTTCTTTGATGCCTGCACATGCAGTTATCATTGGTGAAGAGAGCTTCCATGGGATTTCAAACATGTCTTTTTCTATCACGTTGGCGAGACCTGCATTGATGTTCAACGAAAAAGCCATTCTTTCACTATTTTCAGGTGACTCAAAATTTGCACACAATTTGCAAACATACCTGCTATCAAGAGATCATTCAAATTTGAAGTCCGAGTTTCAAGAGGGAAATGGAAAGAAAATGGTTGACTCAATTGAACAGCAACCTGCAGCAGAAGTGGTACTTGGTGAACACGTGTTTCTCACGGTAGGTGATTACTACGTTGCTGAAAAATCTGGCTAG 3540 0.4201 MEDVCESKDFAFAKQEEAILSFWSNIDAFHTQLSRTKDKPEYIFYDGPPFATGLPHYGHILAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVENEIDKKLGIKKREDVLKLGIGVYNEECRSIVTRYVEEWENVITRTGRWIDFKNDYKTMDLNFMESVWWVFGQLYAKDLVYKGFKVMPYSTGCKTPLSNFEAGQNYKDVSDPEVYMAFPVLGDQHGASFVAWTTTPWTLPSNLALCVNANFTYLKVRNKYTGKVYIVAESRLSTLYNPKDKPKEAVANSSVSVPKNAKTKGTSSGKTDNVLDSFDVLEKFSGASLVGMKYEPLFDYFTELSDTAFRVVADNYVTDDSGTGIVHCAPAFGEDDFRVCIDNQILTKDKLVVAVDDDGCFTEKITDFSGCYIKQADKDIIEAVKAKGRLVKSGAFTHSYPYCWRSDTPLIYRAVPSWFVKVESLKEKLLENNKQTYWVPDFVKDKRFHNWLENARDWAISRSRFWGTPLPLWISEDEQVIVVIDSVAKLEKLSGVKVTDLHRHNIDHITIQHESGRVLRRVDDVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFVAEGLDQTRGWFYTLMVLATALFGKPAFRNLICNGLVLAEDGKKMSKSLKNYPSPMAVIDDYGADALRLYLINSPVVRAEPLRFKKEGVYGVVRDVFLPWYNAYRFLVQNTKRLEVEGLAPFVLLDQATLKSSNVLDQWINSATQSLVHFVRKEMDAYRLYTVVPYLLKFLDNLTNIYVRLNRKRLKGRTGEEDCRTALSTLYNVLLLSCKVMAPFTPFFTEVLYQNMRKACNGSEESIHYCSFPEEEGKGGERIEQSVLRMMTIIDLARNIRERHNKPLKTPLREMVIVHPDKDFLADINGKLKEYVLEELNIRSLDPCNDTLKYASLRAEPDFSVLGKRLGKSMGIVAKEVKAMSQESILAFESAGEVVIANQCLKRSDIKVLRDFKRPDGKTETEIDAAGDGDVLVILDLQHDESLFEAGTAREIVNRIQKLRKKVALEPTDTVEVYFQSLDDDASISLGVLRSQESYIREAIGSTLLQFSLMPAHAVIIGEESFHGISNMSFSITLARPALMFNEKAILSLFSGDSKFAHNLQTYLLSRDHSNLKSEFQEGNGKKMVDSIEQQPAAEVVLGEHVFLTVGDYYVAEKSG* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2381 1179 TIGRFAM ileS: isoleucine--tRNA ligase 9 881 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Mtr4g2381 1179 Pfam tRNA synthetases class I (I, L, M and V) 19 667 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mtr4g2381 1179 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 686 933 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mtr4g2381 1179 MobiDBLite consensus disorder prediction 279 298 - -
Mtr4g2381 1179 Pfam Anticodon-binding domain of tRNA ligase 724 873 IPR013155 GO:0004812|GO:0006418
Mtr4g2381 1179 CDD IleRS_core 396 671 - -
Mtr4g2381 1179 MobiDBLite consensus disorder prediction 282 298 - -
Mtr4g2381 1179 Hamap Isoleucine--tRNA ligase [ileS]. 2 1092 IPR023586 GO:0004822
Mtr4g2381 1179 SUPERFAMILY ValRS/IleRS/LeuRS editing domain 200 429 IPR009008 GO:0002161|GO:0006418
Mtr4g2381 1179 CDD Anticodon_Ia_Ile_ABEc 671 857 IPR033709 GO:0000049
Mtr4g2381 1179 SUPERFAMILY Nucleotidylyl transferase 10 681 - -
Mtr4g2381 1179 Pfam Domain of unknown function (DUF5915) 893 1042 - -
Mtr4g2381 1179 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 49 60 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mtr4g2381 1179 Gene3D - 673 864 - -
Mtr4g2381 1179 PANTHER BNAUNNG00270D PROTEIN 1 1108 - -
Mtr4g2381 1179 PRINTS Isoleucyl-tRNA synthetase signature 42 53 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Mtr4g2381 1179 PRINTS Isoleucyl-tRNA synthetase signature 223 246 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Mtr4g2381 1179 PRINTS Isoleucyl-tRNA synthetase signature 550 563 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Mtr4g2381 1179 PRINTS Isoleucyl-tRNA synthetase signature 590 599 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Mtr4g2381 1179 Gene3D HUPs 395 668 IPR014729 -
Mtr4g2381 1179 Gene3D HUPs 4 212 IPR014729 -
Mtr4g2381 1179 PANTHER SOLEUCYL-TRNA SYNTHETASE 1 1108 IPR023586 GO:0004822
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2381 Mtr-Chr4 37364011 37380740 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2381 K01870 - gmx:100791830 2139.77