Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2356 ATGGTCAGAAAACATGGCTGGCAATTGCCAGCTCATACTTTTCAGGTTGTCGCAATCACTGTATTCTGCTTGTTGGTGATTGCTTTCTATGCTTTCCTTGCTCCGTTTCTTGGAGGTCGTATATGGGAATACACCTTTATTGGTGTTTACTCTCCTGTGGCACTCATTGTTTTCATTCTTTATGTTAGATGTACTGCAATTAACCCTGCGGATCCAGGCATTATGTCTAAATTTGACCCTAGAGTGAGAAATAAGTTTGACTCTGCCCATGATTTATTGGGTAAGCATCAATCTTCTGAACATGGTGGTGTTGCTGCAGGGGAGCATTCTTCCCCGTCATCTGCTGCTTCTAAAAGGTCTATGACAAATATGAGCAAGAAAAGTTCAGTGGAAGGTCCTGATAGAGTAGATGATTTGAGAAATCAGAACAACCCAAACTCATGTGATGTGATTGGGGGAATTTTGTGCATATTATTTTCTCATGAAGATTGCCGGAAACAAGAAGCAACAGCTGATGAACAAGGTGGTGGGGAAGATGCTCTGTTCTGCACTTTGTGCAATTCTGAGGTGCGCAAGTTCAGTAAACATTGTAGAAGTTGTGATAAATGTGTTGATGGCTTCGATCACCATTGTCGGTGGCTTAACAACTGTGTGGGTCAGAAAAACTACCATTCTTTTATTTCTCTTATGGCCTTCAGTCTCGCGTGGCTTGTTATTGAAGCTGGAGTCGGTATTGCTGTTATAGTGCGTTTCTTCGTTAACAAGAGAGGAATGGAATCTGAAATCATTGATAGACTTGGAAATGGATTCTCTCGTCCCCCATTTGCTGCAGTTGTGATGGTGTGTACTGCAGTTTCCGTCTTGGCTTGTGTGCCTTTGGGTGAGCTTTTCTTTTTCCACATGATCCTAATCAGGAAGGGAATCACAACCTATGAATATGTTGTAGCAATGAGAGCCATGAGCGAAGCACCTGCGGATGGGGATATTCCACATAATGCACTTTACTCTCCAACAGGCTCAACTACAACTGGATTGAGTGGAGGAAGTTCTCTTGGGTTGCAGTACAAAGGGGCATGGTGCACCCCTCCTAGGGTATTTGTGGATTATCAGGATGAAGTTGTGCCTCACTTGGAACCTGGAATGCTGCCATCTACTGTTGATCCAGATGCAGCTGGTTTTGCAGAAAGAGGGCAAAAGATGCCAAAAAGACCTGTTCGTATTAGTGCTTGGAAGCTTGCTAAGTTGGATTCTCAAGAGGCGGTGAGAGCAGCTGCAAAAGCCAGGGCATCTTCCTCAGTTTTACGACCTGTAGATAGCCATCGTCCACTTGATGCCGAATTAAGCTCTAGCGGCAACTTGAGCATCAGAAGTAGTATGAGCACAGAGACTGGAATTAATAAGGAAACAAAATATGATTTGAGATTGTCTCCAGTGAGGAATTCGATTGCTCCTAGTCAAGGAAGCCGTGACGAGTATGAAACTGGAACTCAGAGTATGAGTAGTTTCAGTAGTCCAAGCCATGTTCAAGAGGCAGTTACACTCAGCCCTCTTCCCCAGGGGCGCACTTTGGGTGGCTTCAGGGCTGGTACTTCAGTTCCTAGTTTGGTGCCTGAGCGGCCTTTAGCTTCTAAAGCTACATTGCCGAACTTCAAGAACCCGATATCCAATCCTTCTCTTGGATTTGATGGAACAGTGATGCCGAAGGGAACAAGTAACGACCCATTACTGCTTTCAGCTTCCAGCACGTCCATTCTGAGAGATGTGAAACGTACATCAGTTGTCTGGGATCAAGAAGCTGGCAGATATGTCTCGGTTCCGTCATTACCTTTAGAAGCTCGAAATAGGTCATCCCTGCAAGTAGAATTGCCAAATTCAATTGCTGAAACAAGCAGTATTGGAAGGAAACCAGTGATACCTCTGCAGGAGCCGAGGAAACCAGTGATACCCCGGCAGGAACCGTCGTCATCTGCACCTAAGTCTCCAAGGCAGCATGCGCAGAATCTGATGTATACAGGAGAGTCTATCTTTTTTGGTGGTCCATTTTTGAGCGTGGCTGCTAAGGATGGTTTAAAAAATGAAAGACATTTGGGGTCAGCGGAGGCCCATGATAGTATAGCAGTAAACTTGCCCCAAGAGCCAAGATATAGAAGAGATTCACATTCAAATCAGCTTCCAGTGTTTGTTCCTGGTGGTTTTGATACTGCTCTTCAACCTCGGTCAGGCATGAATTAG 2232 0.4489 MVRKHGWQLPAHTFQVVAITVFCLLVIAFYAFLAPFLGGRIWEYTFIGVYSPVALIVFILYVRCTAINPADPGIMSKFDPRVRNKFDSAHDLLGKHQSSEHGGVAAGEHSSPSSAASKRSMTNMSKKSSVEGPDRVDDLRNQNNPNSCDVIGGILCILFSHEDCRKQEATADEQGGGEDALFCTLCNSEVRKFSKHCRSCDKCVDGFDHHCRWLNNCVGQKNYHSFISLMAFSLAWLVIEAGVGIAVIVRFFVNKRGMESEIIDRLGNGFSRPPFAAVVMVCTAVSVLACVPLGELFFFHMILIRKGITTYEYVVAMRAMSEAPADGDIPHNALYSPTGSTTTGLSGGSSLGLQYKGAWCTPPRVFVDYQDEVVPHLEPGMLPSTVDPDAAGFAERGQKMPKRPVRISAWKLAKLDSQEAVRAAAKARASSSVLRPVDSHRPLDAELSSSGNLSIRSSMSTETGINKETKYDLRLSPVRNSIAPSQGSRDEYETGTQSMSSFSSPSHVQEAVTLSPLPQGRTLGGFRAGTSVPSLVPERPLASKATLPNFKNPISNPSLGFDGTVMPKGTSNDPLLLSASSTSILRDVKRTSVVWDQEAGRYVSVPSLPLEARNRSSLQVELPNSIAETSSIGRKPVIPLQEPRKPVIPRQEPSSSAPKSPRQHAQNLMYTGESIFFGGPFLSVAAKDGLKNERHLGSAEAHDSIAVNLPQEPRYRRDSHSNQLPVFVPGGFDTALQPRSGMN* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2356 743 PANTHER PROTEIN S-ACYLTRANSFERASE 19-RELATED 9 535 - -
Mtr4g2356 743 MobiDBLite consensus disorder prediction 96 140 - -
Mtr4g2356 743 MobiDBLite consensus disorder prediction 633 664 - -
Mtr4g2356 743 MobiDBLite consensus disorder prediction 110 129 - -
Mtr4g2356 743 ProSiteProfiles DHHC domain profile. 181 231 - -
Mtr4g2356 743 MobiDBLite consensus disorder prediction 445 466 - -
Mtr4g2356 743 MobiDBLite consensus disorder prediction 442 510 - -
Mtr4g2356 743 MobiDBLite consensus disorder prediction 479 510 - -
Mtr4g2356 743 Pfam DHHC palmitoyltransferase 180 315 IPR001594 GO:0016409
Mtr4g2356 743 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 9 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2356 Mtr-Chr4 37100676 37107221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2356 182 312 Lipid Metabolism Gene Families AT4G22750 29.008 2.89e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2356 K20027 - gmx:100805779 1222.22