Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2355 ATGCATACTCTTGTTCGATCCACTCTCAGAACCAAGTCTACTTCAGCTTTAGCATCTGCAGCAGTTTCCAGAAGTTTTCAAGAAACTCTACTTCAGGCTCCCTTATGGTCGAGGACAAGTAGTTCACAATCTTCTTTGGCAAAGGATAGTTCAACTTCTGATGCGAAAACTGGCCAAGGGTTCAAGAGCCATGATATGCTTGCCCCTTTCACTGCTGGGTGGCAGACTAATGAGTTGAATCCTTTGATTATTGAAAAGTCTGAGGGAAGTTATGTATATGACATAAATGGGAAGAAATATCTTGACGCACTTGCTGGTCTATGGTCCACCGCTCTAGGTGGAAGTGAGCAACGCCTGGTTGATGCTGCCACTGCACAATTAAAGAAGTTGCCATTTTACCATTCCTTCTGGAATCGAACCACAAGACCTGCATTGGATCTAGCCAAGGAGCTACTAGAACTTTTTACAGCCAGAAAAATGGCCAAAGCTTTTTTTGTTAATAGTGGCTCAGAAGCCAACGACACTCAGGTAAAACTTGTATGGTATTATTACAATGCACTTGGAAAGCCAGATAAGAAGAAGTTCATAGCTCGCACTAAATCGTATCATGGTTCAACTTTGATAGCAGCCAGTCTTTCTGGTCTTTCGGCTTTACATCAAAAGTTTGATCTGCCAGCTCCTTTTGTTTTGCATACTGATTGTCCACACTACTGGCGGTATCATCTTCCAGGTGAGACAGAGGAAGAGTTCGCAACCAGATTGGCCAACAATTTGGAAGAGTTAATTCTGAAAGAGGGACCAGAGACAATTGCTGCATTTATTGCAGAACCAGTGATGGGGGCTGGTGGTGTAATACTTCCACCAGCAGCTTATTTCGACAAGATCCAAGCTGTTGTCAAGAAGTATGATATCCTTTTTATTGCAGATGAGGTAATCTGTGCCTTTGGGAGGCTTGGGTATATGTTTGGATGTGACAAATATAACATTAAGCCAGACCTTGTTTCCTTGGCAAAGGCACTTTCTTCTGCATACATGCCAATTGGAGCTATCCTTGTGAGCCCTGAAATTATAGAAGTAATACATTCACAAAGCAACAAACTTGGTGTATTTTCTCATGGGTTCACTTATTCTGGGTCACCCGTACCTTGTGTCGTTGCACTTGAAGCACTCAAGATCTACAAGGAAAGAAATATTGTTGATGTAGTGAACAAGATAGCACCAAAGTTCCAGGATGGCGTAAAAGCGTTTTCTGACAGTCCCATCATTGGAGAGATACGGGGAACTGGCTTGATCCTAGCGACTGAGTTCGTAGACAACAAATCACCCAATGATCCATTTCCTCCTGAATGGGGAGTAGGTGCCTATTTCGGAGCACAGTGCGAGAAGCTTGGGATGTTAGTTCGTGTAGCTGGGGATAATATCATGATGTCTCCACCATTTATTATATCACCTGAAGAAGTTGACGAGTTAATCAGCATTTATGGTAAAGCTTTAAGAGAAACGGAAAAGAGAGTACAAGAGCTCAAGTCTCAACGCAAGTAG 1542 0.4274 MHTLVRSTLRTKSTSALASAAVSRSFQETLLQAPLWSRTSSSQSSLAKDSSTSDAKTGQGFKSHDMLAPFTAGWQTNELNPLIIEKSEGSYVYDINGKKYLDALAGLWSTALGGSEQRLVDAATAQLKKLPFYHSFWNRTTRPALDLAKELLELFTARKMAKAFFVNSGSEANDTQVKLVWYYYNALGKPDKKKFIARTKSYHGSTLIAASLSGLSALHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFATRLANNLEELILKEGPETIAAFIAEPVMGAGGVILPPAAYFDKIQAVVKKYDILFIADEVICAFGRLGYMFGCDKYNIKPDLVSLAKALSSAYMPIGAILVSPEIIEVIHSQSNKLGVFSHGFTYSGSPVPCVVALEALKIYKERNIVDVVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILATEFVDNKSPNDPFPPEWGVGAYFGAQCEKLGMLVRVAGDNIMMSPPFIISPEEVDELISIYGKALRETEKRVQELKSQRK* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2355 513 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 18 508 - -
Mtr4g2355 513 SUPERFAMILY PLP-dependent transferases 67 500 IPR015424 -
Mtr4g2355 513 Pfam Aminotransferase class-III 81 497 IPR005814 GO:0008483|GO:0030170
Mtr4g2355 513 Gene3D - 116 398 IPR015421 GO:0003824
Mtr4g2355 513 CDD OAT_like 81 498 IPR005814 GO:0008483|GO:0030170
Mtr4g2355 513 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 306 343 IPR005814 GO:0008483|GO:0030170
Mtr4g2355 513 Gene3D Aspartate Aminotransferase, domain 1 82 498 IPR015422 GO:0003824
Mtr4g2355 513 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 18 508 - -
Mtr4g2355 513 Coils Coil 491 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2355 Mtr-Chr4 37080050 37091011 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2355 K16871 - gmx:100792355 885.56