Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2348 ATGGGACAAGTGAATGAAGCTGATTATATGAGATCAGAAGTTGCTCTTTTGCAATTTTCTGATGCAGATTTTAAACCTCCACTATCTCCTACGGTTATACACATTCATGATCATCCAACGACCAGTTTTGGCTCAGAATCTGACCCTTCTTCACCAAGTGTCCAACAAAATCAACATCCAAAAGATGAGTGGCTTCCTATCACAGAATCCAGAAATGGTAATGCCAGATTTGCAACTTATCATATTCTTAATTCCAACATTGGATTTCAAGCTCTCATGCTTCCTGTGGCCTTTGCAACTCTTGGTTGGGCATGGGGTAGTGTGTGTTTATCAATAGCATTCATTTGGCAACTTTATACCATATTTCTCCTTATTGAGCTTCATGAATCTCCTTCTGGAAAACGTCACAGTAGATACCTCTTCCTTGCAATGTCTGCCTTTGGTGCAAGGTTAGGAAAAATAGCTGCATTATTTCCAGTAATGTACCTATCAGGAGGCAGCTGTGTAATGTTTATAATCACCGGTGGTGGGACAATGAAGCAATTATTCAAGATTCTTTGCGAAAACGATGATGGGACGATGTGCAGCGCGCACTCGCTGAGCGGAGTCGAGTGGTTCTTAGTGTTTACTTGTTTGGCAATTCTTATTGCTCAGTTGCCTAACCTTAACTCAATGGCTGCTATCTCTTTGGTAGGGGCTGTTGCCTCTATAAGTTACTGCACACTTTTTTGGTCACTTTCTGTTAAGAAAGGTAGGCCAATGGGTGTGTCCTACAATACTACATTGGTGTCACAAGAAGTTACCGTGGTGAAGATTAGTGACATTTTGAATGCTATTGGAATTATTGTGCTAGCTTTCAGAGGTCACAATCTTGTGCTTGAAATTCAGGGGACTATGCCGTCAAATTTGAAAGAAACATCGAAAGAACCAATGCGTAGAGGAGTGACCATTGCGTATATACTCATTGCCGCGTGTGTCATTCCCATCGCAATCGCCGGATTTTGGGCATATGGAAATCAGATACCTGATAAAGGATTGTTAACTGCGTTCCCACAATTCCACAAAGAACAAGCAACAAAATTCTCGATTGGCGCACTTTATGTTTGGGTGATACTACATTGTTTAACTAGCTTCCAAGTCTATGCAATGCCTGTATTTGACAACTTGGAGCTAAGATACACAGTCATAAAAAATCAAAAATGTCCAAGATGGTTGAGAACATGCTTTCGCTTATTCTTTGGAGGGTTCACATTTTTTATTGCTGTAACATTCCCATTCTTACCAAGCCTTTCAGCTCTGATAGGTGGAATGACCCTAGTGCCTCTCACATATGCATACCCTTGTTTCATGTGGTTATCTCTTAAGAAACCTCGTAAAAATGGTGCAATCTGGTTGTTTAATCTTGTACTTGGTTGTTTAGGGATGCTTCTAAGTGTTCTTTTGGTGGTTGCTGCTATAAGGACTTTGGCTGATAAAGGGTTACATGCTAACTTCTTCAAACCATAA 1506 0.4057 MGQVNEADYMRSEVALLQFSDADFKPPLSPTVIHIHDHPTTSFGSESDPSSPSVQQNQHPKDEWLPITESRNGNARFATYHILNSNIGFQALMLPVAFATLGWAWGSVCLSIAFIWQLYTIFLLIELHESPSGKRHSRYLFLAMSAFGARLGKIAALFPVMYLSGGSCVMFIITGGGTMKQLFKILCENDDGTMCSAHSLSGVEWFLVFTCLAILIAQLPNLNSMAAISLVGAVASISYCTLFWSLSVKKGRPMGVSYNTTLVSQEVTVVKISDILNAIGIIVLAFRGHNLVLEIQGTMPSNLKETSKEPMRRGVTIAYILIAACVIPIAIAGFWAYGNQIPDKGLLTAFPQFHKEQATKFSIGALYVWVILHCLTSFQVYAMPVFDNLELRYTVIKNQKCPRWLRTCFRLFFGGFTFFIAVTFPFLPSLSALIGGMTLVPLTYAYPCFMWLSLKKPRKNGAIWLFNLVLGCLGMLLSVLLVVAAIRTLADKGLHANFFKP* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2348 501 PANTHER OS05G0424000 PROTEIN-RELATED 56 497 - -
Mtr4g2348 501 Pfam Transmembrane amino acid transporter protein 72 486 IPR013057 -
Mtr4g2348 501 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 7 56 497 - -
Mtr4g2348 501 MobiDBLite consensus disorder prediction 39 63 - -
Mtr4g2348 501 MobiDBLite consensus disorder prediction 39 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2348 Mtr-Chr4 36956107 36960392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2348 59 501 Organic Solute Cotransporters AT1G47670 50.339 2.25e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2348 - - gmx:100817315 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2348 4 36956107 36960392 Mtr4g2348 4 36956107 36960392 ECH