Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2345 ATGAAGGTGATGAATGAACCAATGCAACTACTTGCTTTGTTGAGTTTCTGCTCAATCTTTTTTCTTGTTGCTTCTGAAGATCCTTATAGATTCTTTGACTGGACTATTACTTATGGTGACATTTATCCACTCGGTGTTAAACAACAGGGGATTCTTATCAATGGTCAATTTCCTGGGCCGGAAATTTACTCTGTTACCAATGACAATTTGATCATCAATGTTCACAATAATTTGCCTGAACCATTTCTTCTATCATGGAATGGTGTTCAACAAAGGAGAAATTCTTACCAAGATGGAGTTTATGGTACAACATGTCCCATCCCTCCTGGGAAGAACTTCACATACACACTTCAAGTCAAAGATCAAATTGGAAGCTTCTTCTATTTTCCATCTCTTGCTTTTCACAAGGCAGCTGGTGGTTTTGGATCCATCAAAATCCTTAGCAGACCAAGGATTCCTGTTCCTTTCCCTGAACCAGCTAATGATTACACATTTCTTATTGGTGATTGGTACAAGATTGATCACACGAAGCTGAGGAAAGTTCTAGATTTTGGACACAAACTTCCACTCCCTCAAGCTGTTCTTATCAATGGTCATGCAAATGGCACATCATTCACTGTCGATCAAGGGAAAACATACAGACTTAGAATATCAAATGTTGGACTAGAACACACACTCAACTTTAGGATTCAAGGCCACATCATGAAATTGGTTGAAGTTGAGGGAACTCACACTGTACAAACGTCTTATGACTCAATAGATGTTCATGTCGGACAATCTTATTCTGTGCTTATCACAGCTGATCAAGCACCTAAGGACTACTACATTGTTGTTTCAACTCGTTTCACTAATAGGGTCCTCACAAGCACTGCAGCACTTCACTACAGTAACTCACAACAACCTCTTTCGGGCCCCATTCCTGCTGGACCGACCACTCAGATCGATTGGTCCATCCAACAAGCTAGATCCATCAGGACAAATCTTACTGCAAGTGGACCAAGGCCTAATCCACAAGGATCATACCACTATGGTATGATAAACATTAGCAGAACGATTAAGCTTGAGAGTTCAGCAGCACAAGTGAATGGCAAGCAAAGATATGCAGTCAATAGTGTCTCTTTCGTACCAGCCGACACTCCTCTGAAGCTAGCTGATTACTTCAAGATTGGTGGTGTTTTCCAAGTTGGAAGCATCCCAGATACCCCTTCTGGTAGATCAATGTACACTGATACTTCAGTCATGGGTGCTGATTTCCGTGCCTTCGTTGAGATCGTGTTTCAGAACCATGAAAGTATCGTTCAAAGTTGGCACATCGATGGATACTCATTTTGGGTTGTCGGAATGGATGGTGGTGTATGGACGCCTAATAGTCGTAACCAATACAACCTAAGAGATGCTGTGTCTAGGAGCACAACACAGGTATATCCTAAGTCATGGACTGCAATTTATATGGCACTAGACAATGTGGGAATGTGGAATGTGAGGAGTGAATTTTGGGCACGACAATATCTTGGACAACAATTCTATATGCGAGTATATTCAGATGCTGGATCAATTAGGGATGAATATCCAATTCCAAAGAATGCTCTTCTTTGTGGCAAAGCAGTGGGTAGAGAAACTAGACCATTATGA 1632 0.413 MKVMNEPMQLLALLSFCSIFFLVASEDPYRFFDWTITYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLIINVHNNLPEPFLLSWNGVQQRRNSYQDGVYGTTCPIPPGKNFTYTLQVKDQIGSFFYFPSLAFHKAAGGFGSIKILSRPRIPVPFPEPANDYTFLIGDWYKIDHTKLRKVLDFGHKLPLPQAVLINGHANGTSFTVDQGKTYRLRISNVGLEHTLNFRIQGHIMKLVEVEGTHTVQTSYDSIDVHVGQSYSVLITADQAPKDYYIVVSTRFTNRVLTSTAALHYSNSQQPLSGPIPAGPTTQIDWSIQQARSIRTNLTASGPRPNPQGSYHYGMINISRTIKLESSAAQVNGKQRYAVNSVSFVPADTPLKLADYFKIGGVFQVGSIPDTPSGRSMYTDTSVMGADFRAFVEIVFQNHESIVQSWHIDGYSFWVVGMDGGVWTPNSRNQYNLRDAVSRSTTQVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYMRVYSDAGSIRDEYPIPKNALLCGKAVGRETRPL* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2345 543 Pfam Multicopper oxidase 379 515 IPR011706 GO:0005507|GO:0016491
Mtr4g2345 543 CDD CuRO_1_AAO_like_1 31 146 IPR034273 GO:0005507
Mtr4g2345 543 PANTHER MULTI-COPPER OXIDASE TYPE I FAMILY PROTEIN-RELATED 17 536 - -
Mtr4g2345 543 Pfam Multicopper oxidase 36 149 IPR011707 GO:0005507
Mtr4g2345 543 Gene3D - 344 539 IPR008972 -
Mtr4g2345 543 CDD CuRO_3_AAO_like_1 376 497 IPR034275 GO:0005507
Mtr4g2345 543 SUPERFAMILY Cupredoxins 156 335 IPR008972 -
Mtr4g2345 543 Gene3D - 160 333 IPR008972 -
Mtr4g2345 543 Gene3D - 19 147 IPR008972 -
Mtr4g2345 543 SUPERFAMILY Cupredoxins 25 176 IPR008972 -
Mtr4g2345 543 PANTHER MULTI-COPPER OXIDASE 17 536 IPR045087 -
Mtr4g2345 543 Pfam Multicopper oxidase 162 297 IPR001117 -
Mtr4g2345 543 SUPERFAMILY Cupredoxins 345 534 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2345 Mtr-Chr4 36917455 36921571 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2345 - - gmx:100818914 989.564
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2345 4 36917455 36921571 Mtr4g2345 4 36917455 36921571 ECH