Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2337 ATGGGAGATGAAGGTATAGTGAGAGGTGTCACAAAGCAGGTTACCGCCGGGAAGGCTACTATATTGGCTCTTGGCAAAGCTTTCCCTCACCAACTTGTGATGCAAGAATATTTAGTTGATGGATATTTTAGGGACACTAATTGTGACAATCCTGAGCTTAAGCAAAAACTGGCTAGACTTTGCAAGACAACCACAGTGAAAACAAGGTATGTTGTTATGAATGAGGAGATACTTAAAAAGTATCCCGAACTTGCTGTCGAAGGCGCCTCCACCGTAAAACAACGACTAGAGATATGTAACGAGGCGGTGACGCAAATGGCAATCGAGGCTTCCCAGGTTTGCATAAAGAATTGGGGTGGATCTTTATCGGACATAACTCATGTGGTTTATGTTTCATCCAGTGAAGCTAGGCTACCCGGCGGTGACCTTTACCTATCAAAAGGACTGGGACTAAACCCTACTATTCGACGAACCATGCTCTATTTTTCGGGATGCTCAGGAGGTGTGGCTGGTCTACGCGTTGCGAAAGACATAGCTGAGAACAACCCTGGAAGTAGAGTTTTGCTTGCTACTTCTGAGACTACAATTATTGGATTCAAGCCACCAAGTGCTGATAGACCTTATGATCTTGTTGGCGTAGCACTCTTTGGAGATGGTGCTGGTGCTATGATAATTGGTTCAGACCCAAAATTGGAAACTGAGATGCCATTATTTGAGCTACACACTTCAGCTCAAGAGTTTATACCAGACACAGAGAAGAAGATTGATGGGAGGCTGACGGAGGAAGGGATAAGCTTCACGTTAGCGAGGGAACTTCCTCAGATCATTGAAGACAACGTTGAGGGATTCTGTGACAGACTAATGGATGCTGTTGAGTTGGAGAATAAGGAGTATAATAAGTTGTTTTGGGCTGTGCATCCAGGAGGGCCTGCGATATTGAATCGCGTGGAGAAGCGACTTGAGTTGTCGCCAGAGAAGCTGAATGCTAGCAGGAAAGCTCTTATGGATTATGGAAATGCTAGCAGCAATACCATTATTTATGTGCTTGAGTATATGCTAGATGAGAGCAAGAAGATTAGAAAGGAAGGAGGATATCCTGAATGGGGTTTGATACTTGCTTTTGGACCTGGAATTACTTTTGAGGGGATTCTAGCAAGGAACCTATGTCCTTGA 1173 0.4433 MGDEGIVRGVTKQVTAGKATILALGKAFPHQLVMQEYLVDGYFRDTNCDNPELKQKLARLCKTTTVKTRYVVMNEEILKKYPELAVEGASTVKQRLEICNEAVTQMAIEASQVCIKNWGGSLSDITHVVYVSSSEARLPGGDLYLSKGLGLNPTIRRTMLYFSGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPKLETEMPLFELHTSAQEFIPDTEKKIDGRLTEEGISFTLARELPQIIEDNVEGFCDRLMDAVELENKEYNKLFWAVHPGGPAILNRVEKRLELSPEKLNASRKALMDYGNASSNTIIYVLEYMLDESKKIRKEGGYPEWGLILAFGPGITFEGILARNLCP* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2337 390 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 13 388 IPR011141 GO:0009058|GO:0016747
Mtr4g2337 390 Pfam Chalcone and stilbene synthases, N-terminal domain 11 229 IPR001099 -
Mtr4g2337 390 Gene3D - 237 387 IPR016039 GO:0016746
Mtr4g2337 390 PANTHER TYPE III POLYKETIDE SYNTHASE B 13 388 - -
Mtr4g2337 390 SUPERFAMILY Thiolase-like 236 386 IPR016039 GO:0016746
Mtr4g2337 390 Gene3D - 6 236 IPR016039 GO:0016746
Mtr4g2337 390 CDD CHS_like 19 384 - -
Mtr4g2337 390 PIRSF PKS_III 7 389 IPR011141 GO:0009058|GO:0016747
Mtr4g2337 390 Pfam Chalcone and stilbene synthases, C-terminal domain 239 388 IPR012328 -
Mtr4g2337 390 SUPERFAMILY Thiolase-like 15 231 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2337 Mtr-Chr4 36850896 36852494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2337 149 378 Acyl Lipid Metabolism Gene Families AT1G71160 26.437 1.09e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2337 - - vun:114168705 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2337 4 36850896 36852494 Mtr4g2337 4 36850896 36852494 ECH