Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2318 ATGTCAGGATCCGGAACAGCAACAGGTTGTTACAAATGCGGCAGACCTGGTCACTGGTCACGCGACTGTCCTTTCACCTCCCCCGCTTCCAATTCCAATCTCAATCCAAACCCTAACGCCACCACCTCCACCGCCGATCCACCTCCACCTACCTCCACCTTCAAACCCTCCGGACCCAGATCCGCTGTCGAAAAACCCAAAAAGCCTCCACGTACCCGCCCCAAACTCACTCCCGAGCTTCTTCTATCTGATGATGGCCTCGGTTATGTTCTTCGCTATTTCCCTCGCAACTTCAAATACCACGGTCGCGGCCATGAGGTTCGTGATTTGGGTAAGTTGCTTCACTTATACTCTGACTGGCACTCTCGTTTGCTACCTTATTACTCTTTCAATCAATTTGTCAATAAAGTTGAGAAAGTTGCTGCTACAAGACGTGTTAAGACTAGCCTTAGAGAATTAAGAGAAAGAGTTGCAAATGGCGGGGATCCATCAAAATTGCGTGAACCACCAGTTGTGGACGATGTCCCAGATGGTGAACAAGAAAATGGGGAAGCAAGTCATCAAGACAATGAGATGTTTGCAGAACCTGAAACTGTTAACAACATTCAAGAAGATTTGTTCAATGATATATATGATAAAGCTACCGAAGAACCTTCTCAGCCCGTGCAAAATGTGATTTCTGTGAGTACTGATCCCAAAAGTAGCACAACTGAAAAGACATCAAATGAAGTCCCAAATAATGGAACCAGTCTGTCCAGCAGTGCTGAGATAACAGCAGAGCAGAGAGCCCGTATGGAAGCAAATAGGTTGAAGGCACTAGAAAGGCGTGCAGCTAAAGCCAGCATACCACAGTCTTCCTAG 861 0.4681 MSGSGTATGCYKCGRPGHWSRDCPFTSPASNSNLNPNPNATTSTADPPPPTSTFKPSGPRSAVEKPKKPPRTRPKLTPELLLSDDGLGYVLRYFPRNFKYHGRGHEVRDLGKLLHLYSDWHSRLLPYYSFNQFVNKVEKVAATRRVKTSLRELRERVANGGDPSKLREPPVVDDVPDGEQENGEASHQDNEMFAEPETVNNIQEDLFNDIYDKATEEPSQPVQNVISVSTDPKSSTTEKTSNEVPNNGTSLSSSAEITAEQRARMEANRLKALERRAAKASIPQSS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2318 286 MobiDBLite consensus disorder prediction 215 262 - -
Mtr4g2318 286 MobiDBLite consensus disorder prediction 154 191 - -
Mtr4g2318 286 Pfam Zinc knuckle 9 24 IPR001878 GO:0003676|GO:0008270
Mtr4g2318 286 Pfam Replication Fork Protection Component Swi3 75 156 IPR012923 GO:0005634|GO:0006974|GO:0048478
Mtr4g2318 286 MobiDBLite consensus disorder prediction 22 79 - -
Mtr4g2318 286 Gene3D - 6 75 - -
Mtr4g2318 286 SUPERFAMILY Retrovirus zinc finger-like domains 7 27 IPR036875 GO:0003676|GO:0008270
Mtr4g2318 286 MobiDBLite consensus disorder prediction 217 259 - -
Mtr4g2318 286 PANTHER TIMELESS INTERACTING-RELATED 6 284 IPR040038 GO:0000076
Mtr4g2318 286 SMART c2hcfinal6 9 25 IPR001878 GO:0003676|GO:0008270
Mtr4g2318 286 ProSiteProfiles Zinc finger CCHC-type profile. 10 24 IPR001878 GO:0003676|GO:0008270
Mtr4g2318 286 MobiDBLite consensus disorder prediction 24 41 - -
Mtr4g2318 286 PANTHER TIMELESS-INTERACTING PROTEIN 6 284 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2318 K10904 - gmx:100808422 353.599