Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2314 ATGCCTCCCGCGCGTCGACGCGGAGCGAACAAAGCCAAAGAGAACGGACACTTGCGGTTAGGCGATCTTGTCCTTGCTAAGGTTAAGGGCTTCCCTGCTTGGCCTGCCAAGATAAGTAGGCCTGAAGATTGGGAGAAAGCTGTTGATCCGAAGAAATATTTTGTTCAATTCTTTGGCACCAATGAGATAGCTTTTGTTGCACCCACAGATATTCAGGTATTTACAAGTGAGTATAAAAGTAAGTTGTCTGCTCGGCTTCATGGCAAGACAAAGTACTTTACCCAAGCTGTGAAGGAAATATGTGCAGCTTTTGATGAGTTTCAGAATCAGAAGACTAGTGGCGACGACACGGATGATTCTCGGATTGGTTCAGAAGCTCCTACTGTTGATGAGGCAGTGGGTAATTCAAAGGATACCACTGATGCTGTGACATCTAATGCTGAAAAGGATAATATCTATGTGAGTAATGCTGGCTCCGATTCGGAGGACTGTTTGCAAAAAACCAGAGAGAGGGGTAGCCTAGATGAACAGGTCACTGAGTCTGGCCGTCCAAATGACAGTTCTTCTGTTTCATCACCTTTAGTCAAAAGTAAATTATCCACTGGATCAGAGATAAAGAAGAATTCTAGCAAACCCACCCTTAAAAGTGCAAGTAATGTTAATGATTTTGGGCAACATGATAACGGAAATAGTGTCTTAACAAATGGGAGTACGCCAAGAAAGCTTGTTACTGGTTCAAAGAGGAGACTTGAAGTTGCAGATGATAGAAATAAAAATGGTGGATCTTCTGCTGGAACAATTTTGAAGGTGGGAAGCTCTACTGGCAGCGCTGATCTTTTCAGGTCGGGGGCGACATTTAAAATAGGAAAGAAAGGAAAAGATGCATCTGCTGTTAAATCAGATTCTCCAGACACTCTTAAACCAGACTTGAATGGTAATACTGGAGAAAAAGGTAAGAACTTGATTTCAAAAAACACAAGTCTTGAGGTAAAAAATGAATTACACGAGATCATGTCTGATGCCAAGGAGGCTGGTGGCAAAAATTCAAGCATGGGAAAGAAGAACCAAGTTCATACGAAGCATAATGTGGGAGCAAATGAATCCTTACATGCTACGAAGAAGTTGAAACGCATGGATGCTAAAGATGATTCAACTTCAGGGCACATCCCAAAAGATGTGAAAAGTACTTTGCCTTGCTCTACTTTCGTTGAAGATAAATCATCTAAAATGTTCGAGTTGAAAAGGTCCACATCAAATTCAAAAGCAGAAAAAAGCTCTGGCCGTGAGTTGCCACCTACAATCAAACATCATAGCCAAGTTCAGAAAACTATGCCTGATTCTGATAGAATTGCTTCTGATGAGAAAAAAGATTGGAGTAATCTTAAACTGAAAGGTGATATGAAGAATGTTATGACAAAACAAGTACAGAAGAAACGTAAAGCTGTTTGCCTTTATGAAGACGATGATAAACCTAAAACTCCTGTTCATGGAGGAGCTGCAAAAAATAGCAAGTCACCTTTTGCTTCAGATGTCAAGAAGGGCAATAATGCACATTCTGAAAAATCTGATACTGCTCGTCTGGCTCTCAGAAATTCTGGTGAATTTGTGGACGCTCACTTGAAAGAGTCGTCTTCTCAATTACATAGTCATACATCATCAATTAAGCCCCCCCAAAAAGAGAAAGCTGATGAAGTCATTACTGTGCATGTTCCTCATAGTCATGATAAGTTAGATTCAAAGCAGTTTCCTTCTAAGGCGGCAAAAGTAAGCTCTGCCTCTCCAGTAAAATCACCTCAGGCAGTTCCCGCAATAACCAAGTCAAATGCTGAGCGGAGTAAATCTTCCAAATCTTTGCTTAAAGCTTCCAGCATTGCTACTCCAAAGAAAGCTGATAATGGGTCTTCAAAATCTTCACATAACCTCAGCTCTTCTCAGAACCAGGTTTCTGCTCATAAGAAGAAGCCGGCATCTTCAGCTGAAGTTTCTAAGACTACTCCAAAGACATTGCCTCAGGCAGTTGACATTCCTGTGTCAGCAGTAGATTTTAAGGAGCCTGATGCACTACATGTTGATAGATTGGAAGAGGGTATGGAAGAAAGAAGTAATATGAAGAATCTTATTGCAGCTGCCCAGGCAAAATGGAAAAAAGCTCATTCTCAATATCTTTCTTCTGATATTCACCACGTTCAGGGAGAGACTCCTAGCCCCTCCACACTACAGCCATTTCTGTCTGTCTCAAGTAACTTTGCACATGCAGATGTGCAGGGAGTTCATGAGCACACCACTTCGGTTTCTCCTCCAACTAACGAGTATCACTCTGCATCTCAAAATCAGCTCGATGCTGATGAAATTGAGGAGAGAAGGGTCAGTTCAGTGCAAAGGGGTCCTGGAGGCTCTCTCAGTGGTGGTACGGAGGCTGGTGTTGCTCGTGATGCTTTTGAAGGAATGATTGAAACTTTGTCAAGGACCAAGGAAAGCATTGGGCGTGCAACGCGTCTTGCCATAGACTGTGCTAAGTATGGCATTGCCAACGAGGTTGTTGAACTTCTCATTCGGAAATTGGAAAATGAAACTAGTTTTCATCGCAAAGTGGATTTGTTTTTTCTTGTTGATTCTATCACCCAGTGTTCACATAGTCAAAAAGGAATTGCTGGAGCTTCTTACATCCCTACAGTTCAAGCAGCGCTGCCACGTCTTCTAGGTGCTGCTGCTCCCCCTGGAGCTAGTGCCCGTGAAAATCGTCGTCAATGTCACAAGGTTTTGAGGTTGTGGCTTGAGAGGAAAATTTTGCCTGAGTCCGTTATTCGCCATTACATGGATGAAATTGGGGTTTCAAATGATGATATCACAGTTAGCTTTTCCTTCAGACGTCCATCTCGTGCTGAGCGATCTGTGGATGACCCAATTAGAGAAATGGAAGGCATGCTTGTTGATGAATATGGAAGTAATGCAACATTTCAGCTGCCTGGCTTTTTGTCTTGCCATGCATTTGATGAAGATGAGGACGAAGAAGATTTACCAATCAATTCATGTACAGATATGTATGGTACATCTCCAGTAGATCCCACACCCAAGTTTGGAGGATCAGAAACCGACACTGTGACCCCAAATGACAAGCGCCATTGTATCTTGGAGGATGTGGATGGTGAGCTAGAAATGGAAGATGTTTCAGGTCACCCAAAGGATGAGAAACCTGTATATTTGGACAGTTCTGTCGAAACTGATATGCTTCTTCAGAGCTCAAATAGGAATTTAGACCCAACTTCAGATATTGCAGAAGACATATTGGCTACTCCTGAGGGTTCCATTCCATTACCTCTTGATTCACCTCCTCCAACCCCACCTTTGCCTTCTTCACCACCTCCACCTCCTCCTCCATCATCTCCATCTCCTCCCCCACCACCACCACCACCTCCAATATTGCAACCATTGCCTCTTTCTTTACCATCCTCAGCCCCACCAGTATCATTGGTTCCTCAATCGTCTGGACTGGCTCGGCCTTCACATGTCTCCCAATCATTAATGCCACCTCAGTCCTATCAGTCATCCCCAAAGTTGGGGTATCAGCAGAATGTACCTCATGACTTCAGTAGACAATTAGAATACGGACAGAATGATTTGTATATAAATGCCCAAGTTCATCAACCTAACCATCAGTATCAGCAGGGTAACACCCCATATGTTCAGAGACATACACATCCTGCCCCACCCCAAAATCCATCAAATCAGTTTTCATATACAAATCAGACAGTTCAGCAACACCTTCCACATACATTCCATCCTCCATTTCCTTTACCATCTCTTCCAGATAACCTAAGGCAATTTGTTAGTGATGAGCAAAGGAGAATGTCATCGACAAACAATCAACATCAAAATGTTGTATGGAGAGGGATAAATCCTACAGGCCCTCCCTTTGGGCAAGAAGGTTTCCGACCACCACTTGAAAGGCCTCCATTAAGCAATGTAGGTTTTCATCGAGCAGTTTCAAGCACCCTACCTAGTGCACCAGTACCAGGACATGGTGTTCCTCAGATGTTGCCTGGCAGGCCAGACATTACTACTGTTAGTTGGAGACCCACTTGA 4083 0.4315 MPPARRRGANKAKENGHLRLGDLVLAKVKGFPAWPAKISRPEDWEKAVDPKKYFVQFFGTNEIAFVAPTDIQVFTSEYKSKLSARLHGKTKYFTQAVKEICAAFDEFQNQKTSGDDTDDSRIGSEAPTVDEAVGNSKDTTDAVTSNAEKDNIYVSNAGSDSEDCLQKTRERGSLDEQVTESGRPNDSSSVSSPLVKSKLSTGSEIKKNSSKPTLKSASNVNDFGQHDNGNSVLTNGSTPRKLVTGSKRRLEVADDRNKNGGSSAGTILKVGSSTGSADLFRSGATFKIGKKGKDASAVKSDSPDTLKPDLNGNTGEKGKNLISKNTSLEVKNELHEIMSDAKEAGGKNSSMGKKNQVHTKHNVGANESLHATKKLKRMDAKDDSTSGHIPKDVKSTLPCSTFVEDKSSKMFELKRSTSNSKAEKSSGRELPPTIKHHSQVQKTMPDSDRIASDEKKDWSNLKLKGDMKNVMTKQVQKKRKAVCLYEDDDKPKTPVHGGAAKNSKSPFASDVKKGNNAHSEKSDTARLALRNSGEFVDAHLKESSSQLHSHTSSIKPPQKEKADEVITVHVPHSHDKLDSKQFPSKAAKVSSASPVKSPQAVPAITKSNAERSKSSKSLLKASSIATPKKADNGSSKSSHNLSSSQNQVSAHKKKPASSAEVSKTTPKTLPQAVDIPVSAVDFKEPDALHVDRLEEGMEERSNMKNLIAAAQAKWKKAHSQYLSSDIHHVQGETPSPSTLQPFLSVSSNFAHADVQGVHEHTTSVSPPTNEYHSASQNQLDADEIEERRVSSVQRGPGGSLSGGTEAGVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLENETSFHRKVDLFFLVDSITQCSHSQKGIAGASYIPTVQAALPRLLGAAAPPGASARENRRQCHKVLRLWLERKILPESVIRHYMDEIGVSNDDITVSFSFRRPSRAERSVDDPIREMEGMLVDEYGSNATFQLPGFLSCHAFDEDEDEEDLPINSCTDMYGTSPVDPTPKFGGSETDTVTPNDKRHCILEDVDGELEMEDVSGHPKDEKPVYLDSSVETDMLLQSSNRNLDPTSDIAEDILATPEGSIPLPLDSPPPTPPLPSSPPPPPPPSSPSPPPPPPPPPILQPLPLSLPSSAPPVSLVPQSSGLARPSHVSQSLMPPQSYQSSPKLGYQQNVPHDFSRQLEYGQNDLYINAQVHQPNHQYQQGNTPYVQRHTHPAPPQNPSNQFSYTNQTVQQHLPHTFHPPFPLPSLPDNLRQFVSDEQRRMSSTNNQHQNVVWRGINPTGPPFGQEGFRPPLERPPLSNVGFHRAVSSTLPSAPVPGHGVPQMLPGRPDITTVSWRPT* 1361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2314 1360 SMART PWWP_4 18 75 IPR000313 -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 178 242 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 133 162 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 1330 1360 - -
Mtr4g2314 1360 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1360 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 370 389 - -
Mtr4g2314 1360 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 111 125 - -
Mtr4g2314 1360 ProSiteProfiles CID domain profile. 805 946 IPR006569 -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 759 805 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 485 672 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 110 274 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 290 326 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 259 274 - -
Mtr4g2314 1360 Coils Coil 693 713 - -
Mtr4g2314 1360 Gene3D - 804 948 IPR008942 -
Mtr4g2314 1360 Gene3D - 10 115 - -
Mtr4g2314 1360 SMART 558neu5 812 943 IPR006569 -
Mtr4g2314 1360 SUPERFAMILY Tudor/PWWP/MBT 14 118 - -
Mtr4g2314 1360 CDD HDGF_related 18 103 IPR035496 -
Mtr4g2314 1360 Pfam PWWP domain 21 104 IPR000313 -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 584 671 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 1100 1190 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 163 177 - -
Mtr4g2314 1360 Pfam CID domain 812 936 IPR006569 -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 1104 1152 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 759 778 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 412 455 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 441 455 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 1153 1190 - -
Mtr4g2314 1360 PANTHER PROTEIN HUA2-LIKE 1 1 1360 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 365 392 - -
Mtr4g2314 1360 MobiDBLite consensus disorder prediction 554 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2314 Mtr-Chr4 36613390 36624135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2314 - - mtr:MTR_4g075060 2076.98