Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2312 ATGGCGACGCTGCAATTCACATTCTCAGACTCAACTACCACACTATGCAGACCGTTATCTCAATTACCTTCTTCTAAATCCACCATCATTCATTCTCCGAGACCTCGAAGCTTCGTTGTTAAAGCTTCTCTCGAACCTTCCAGAACCAGAAGACAGTTCATTGCAGAAACCACTGCTATATCAGTGCTGCTTCCTTCTCAGTTGGCCAAATCCGAAGAAACTCTTTCTGAATGGGAAAGAGTTTATCTTCCTATCGATCCTGGTGTTGTTCTTCTTGATATCGCTTTTGTTCCTCAAGATCCTAATCATGGTTTTCTTCTGGGGACGAGGCAAACCCTTTTGGAGACTAAAGATGGAGGAAGAACTTGGGCTCCACGTTCTATACCATCTGCAGAAGATGAAGATTTTAACTATAGGTTTAATTCTATCAGCTTCAAAGGGAAAGAAGGATGGATCGTAGGAAAACCTGCAATTCTGTTGTACACTCCTGATGCTGGAGAGAGTTGGGAAAGGATACCACTCAGTGCTGAACTTCCTGGCGATATGGTATACATAAAGGCAACTAATGAGAAGAGTGCGGAAATGGTGACTGATGAAGGTGCAATATATGTTACCTCAAACAGAGGATACAATTGGAAGGCTGCTGTTCAGGAATCGGTGTCGGCTACTCTTAATAGAACAGTTTCTAGTGGTATTAGTGGTGCAAGTTATTACACTGGAACTTTCAATACTGTCAATCGATCTCCCGATGGAAGGTATGTTGCAGTCTCAAGTCGTGGCAACTTCTACATGACCTGGGAGCCTGGTCAGGCATACTGGCAGCCACATAACAGAGCAGTTGCCAGAAGAATCCAGAACATGGGATGGAGAGCTGATGGTGGTCTCTGGCTTCTTGTTCGTGGAGGTAGTCTTTTTCTCAGCAAAGGCACAGGGATAACTGAAGAATTTGAGGAAATTCCTGTTCAAAGCCGAGGGTTCGGCATTCTTGATGTCGGGTATCGTTCAACGGACGAGGCTTGGGCAGCAGGTGGCAGTGGTATTCTCTTGAGAACCAATAATGGTGGCAAGTCATGGATCCGTGACAAAGCTGCTGACAACATTGCTGCAAATTTATACTCAGTAAAGTTCATTGACGACAAGAAGGGATTTGTATTGGGAAATGATGGAGTCTTGCTTCGCTACCTTGGATAG 1191 0.4458 MATLQFTFSDSTTTLCRPLSQLPSSKSTIIHSPRPRSFVVKASLEPSRTRRQFIAETTAISVLLPSQLAKSEETLSEWERVYLPIDPGVVLLDIAFVPQDPNHGFLLGTRQTLLETKDGGRTWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPAILLYTPDAGESWERIPLSAELPGDMVYIKATNEKSAEMVTDEGAIYVTSNRGYNWKAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNFYMTWEPGQAYWQPHNRAVARRIQNMGWRADGGLWLLVRGGSLFLSKGTGITEEFEEIPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTNNGGKSWIRDKAADNIAANLYSVKFIDDKKGFVLGNDGVLLRYLG* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2312 396 Gene3D - 43 292 IPR015943 GO:0005515
Mtr4g2312 396 Pfam Photosynthesis system II assembly factor YCF48 73 394 IPR028203 -
Mtr4g2312 396 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 45 396 - -
Mtr4g2312 396 SUPERFAMILY Oligoxyloglucan reducing end-specific cellobiohydrolase 77 395 - -
Mtr4g2312 396 PIRSF Photosystem_II_Ycf48-like 43 396 IPR016705 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2312 - - gmx:100810566 689.493