Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2306 ATGAAGAACTTAAACATATCTTTGTGCATGGTTATGGCAGTAGTACTTGTTGGCTTAGTTGGAAGTGTACCTTTAGGTTTCAACTATGGTGATGCTCTTGACAAGAGTTTGATGTTCTTTGAAGCACAAAGGTCTGGTAAATTACCACTGCAACAACAGCGTGTCAAATGGCGAGCTGATTCTGGTCTCAAGGATGGAATTCAGCAAGGAGTAGACTTGGTGGGAGGGTACTATGATGCAGGTGATCATGTGAAGTTTGGGCTACCAATGGCTTACAGTGTCACAATGCTTGCATGGGGGGCTATTGAGTTTAGCAAGGAAATCACAGGCTTAAACCAAATGGGACATACATTATGGGCCATTAAGTGGGGAACTGATTACTTCATCAAAGCACATCCTCAGCCTAATGTTCTTTGGGGACAGGTGGGTGATGGAACTTCTGATCACTACTGCTGGGAACGTGCCGAAGATATGACTACTTCAAGAACTGCCTACAAAATTGATGAACAACACCCTGGCTCTGATCTTGCAGGTGAAACTGCAGCTGCATTGGCTTCTGCAGCCATAGCTTTCAGGCCATACAACTCTTCTTACTCTAATCTTCTGCTAGTACACGCAAAACAGCTCTTCACATTCGCAGATAGGTACCGAGGTCTATATGACGAATCCATATCTTCTGCTAAGCAATTCTATGATTCTTCTGGTTATTCAGATGAATTGTTATGGGCTGCTGCCTGGCTGCACCGAGCAACTGGTGATGAATACTACCTAAAGTACGTCGTGGACAATGCGGTGTATATGGGTGGAACCGGATGGGCGGTGAAAGAGTTCTCTTGGGACAACAAATATGCTGGTGTCCAGACCCTCCTATCAAAGGTATTACTAGAAGGCAAAGCTGGTCCATATGCATCAACACTAAAGCAATATCAGGCCAAAGCAGATTATTTTTCATGCGCCTGTTTGCAAAAGAATGATGGTTACAATGTCCAGAAAACTCCAGGTGGCTTGTTATACTTGCACGAATGGAACAATATGCAGTATGCTTCCTCTGCTGCATTTCTTTTAGCCGTTTACTCAAACTATCTGTCAGCTGCAAAGGCACAGCTCAACTGTCCTGAGGGTCAAATTCAGCCTCAGGAGCTCCTCAATTTTGTCAAGTCACAGGCTGATTATATCCTTGGTAAAAACCCGGAGGATATGAGCTACTTGATTGGATATGGACCAAAATATCCTATTCATGTTCACCACAGAGGCTCTTCCATTGCTTCAGTTTTTTCTCTTCACTCTGAGGTTGGTTGTGCACAAGGATTCGACGCATGGTATAACCGTATTGAGCCAAATCCTAATGTCATCCATGGAGGCCTTGTGGGAGGTCCAGATAGAAATGATGACTACACTGATGACAGGTCCAATTATGAACAGAGTGAGCCTACACTCTCAGGATCTGCTCCTCTTGTAGGCATCTTTGCTAAACTGCAAAGTTCATATGGCAATATAGGTTCCTACCATAAATATAATGAATCGCCACTGCCCCAGCAAAAAACACCAAGTACAACAAACCTTTACAATAATCCCTCAAAGAAAACAAACCTCTACAAAGAACCAACACCTAAAACACCACAAGGTGCACCAGTTGATTTCCTTCACTCAATTTCCAGCTCATGGACTGTTGGTACAACAACTTATTACCGACACAAGGTGATAATCAAGAACACTTCTGCAAAGCCAGTCTCAGATCTTAAGTTGGTGGTTGAAAATCTCTCAGGCTCAGTATGGGGTCTGTCTCCAACTGGAGAGAAGAATACATATGAACTTCCACAATGGCACAAGGTTTTAAACCCTGGCTCTGAATGTATGTTTGTTTATGTTCAAGGTGGACCCCAAGCAAAAATCTTGATTCAAAGCTTCCACTAA 1914 0.4331 MKNLNISLCMVMAVVLVGLVGSVPLGFNYGDALDKSLMFFEAQRSGKLPLQQQRVKWRADSGLKDGIQQGVDLVGGYYDAGDHVKFGLPMAYSVTMLAWGAIEFSKEITGLNQMGHTLWAIKWGTDYFIKAHPQPNVLWGQVGDGTSDHYCWERAEDMTTSRTAYKIDEQHPGSDLAGETAAALASAAIAFRPYNSSYSNLLLVHAKQLFTFADRYRGLYDESISSAKQFYDSSGYSDELLWAAAWLHRATGDEYYLKYVVDNAVYMGGTGWAVKEFSWDNKYAGVQTLLSKVLLEGKAGPYASTLKQYQAKADYFSCACLQKNDGYNVQKTPGGLLYLHEWNNMQYASSAAFLLAVYSNYLSAAKAQLNCPEGQIQPQELLNFVKSQADYILGKNPEDMSYLIGYGPKYPIHVHHRGSSIASVFSLHSEVGCAQGFDAWYNRIEPNPNVIHGGLVGGPDRNDDYTDDRSNYEQSEPTLSGSAPLVGIFAKLQSSYGNIGSYHKYNESPLPQQKTPSTTNLYNNPSKKTNLYKEPTPKTPQGAPVDFLHSISSSWTVGTTTYYRHKVIIKNTSAKPVSDLKLVVENLSGSVWGLSPTGEKNTYELPQWHKVLNPGSECMFVYVQGGPQAKILIQSFH* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2306 637 Gene3D - 25 496 IPR012341 GO:0005975
Mtr4g2306 637 SMART CBM49_2 545 625 IPR019028 GO:0030246
Mtr4g2306 637 MobiDBLite consensus disorder prediction 452 479 - -
Mtr4g2306 637 PANTHER ENDO-1,4-BETA-GLUCANASE 6 592 - -
Mtr4g2306 637 Pfam Glycosyl hydrolase family 9 29 488 IPR001701 GO:0004553|GO:0005975
Mtr4g2306 637 Pfam Carbohydrate binding domain CBM49 547 624 IPR019028 GO:0030246
Mtr4g2306 637 SUPERFAMILY Six-hairpin glycosidases 27 498 IPR008928 GO:0005975
Mtr4g2306 637 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 391 417 IPR018221 -
Mtr4g2306 637 PANTHER ENDOGLUCANASE 5 6 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2306 Mtr-Chr4 36557505 36561404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2306 27 637 Glycoside Hydrolase AT1G48930 69.005 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2306 K01179 - gmx:100812170 1079.7