Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2303 ATGTACTTGAGGAGAATACAGTGCCGAGATCGGAGATGGGCTTTGTTGTTGCAACCATCAAAATACTTCTTTAGACCAAAGTTCTCTGATCATTCTTTGTTACCTAAGACCACGGTCAAAGAATATTCTTCACATGGCGGTATTATCAGAAGAGATGTTTTAGGTTCAGATTCATCTAGTCATATTTTGTCTAGACATAGTTTTACTGGTCTGAACAAAAGACCTAGTTTTTGTCTTAGGAGTAGTCAAATACGCACTTTCAGTTCTGAAAGTGATGGAAGTGGTGCAAGTGAGAATAAACAAGTACATGTTAACGATGGAGCTAATTTTGATAAGGGGAAGAGTCAGCTAGATAAGTCTGGTCAATATGTTAAATGCACCAATTCGCATGCCCGGCTTGGAGAATTGGATCAAGAGGAATGGCTTACTAATGAGAAGCTTGCTGTAGAAAGTAAAAAGAAAGAATCGCAATTTTTGACCAAAAAAGATAGGTTTAAAAATGAGTTTTTGAGAAGAATTGTTCCGTGGGAGAAAATAAACATTTCATGGGACACATTTCCTTATCATATCCATGAGCATACGAAAAATCTTCTGACGGAATGTGCTGCTTCCCATTTGAGACATAACAAGTTTGCTTCGTCTTATGGCATTCACCTTGCATCTTCAAGTGGAAGAATTTTGCTTCAGAGCATTCCCGGCACCGAGCTCTATCGCGAGAGAGTAGTTAGAGCTCTTGCACAAGATTTACAAGTTCCGTTGTTGGTGCTTGACAGCAGCGTACTTGCTCCTTATGATATTGATGATGATCAATCTTCAGACTCCGAGTCTGATGATGATAATGCAGAATCTGGGGAAGAGGGTTCGGAGAATGAGGATGATAATGATGCTAGTAATGAAGAAGAGTGGAGCAGCACTGAAGCGAAGTCAGATGCTAGTGATAATGAAGATGATGTCGTAGCATCTGCTGAAGCTGCCCTTAAGAAAGTTAAAGATGCTGTTAAGAAACTCATCCCTTACAATGTTGAAGAATTGGAGAAGATGGTCACTGGTGGAGATACTAGAGATGATACTGCTGAGTCATCAAATTCTGATGATGCCACGTCTTCTGATAAATCTGGATCTAAGCTAAGAAAAGGTGCCCGCGTGAAGTATATTGGGCCTTCAATAGAATTTTCAGATGCCGATGATAGGGAAATAAGTTTATCTAACGGTCAGAAAGGAGAGATATATGAGGTTAATGGAGACCGAGTTGCTGTCATTTGGGATATTAATGAAGAGAAGGCCAATGAAAATGAGGTGGAAAACCTTAACAACAGTCGTGCAAAACCATCAGTTTATTGGATAAATGTTAAGGACATAGAGAATGATCTTGATGCTCAATCACATGATTGCTACATAGCAGTGGAGGCTTTATGTGAGGTTTTGAATTCCAAAAGACCTCTTATAGTGTATTTTCCGGATAGTTCACAGTGGTTGCATAAATCAGTTCCTAAGTCAAATCGAAATGAGTTTTTTCACAAGGTTGAGGAGATGTTTGACCGTTTATATGGCCCTGTAGTATTGATTTGTGGCCAAAACAAAGTTCATTCAGGATCAAAGGAGAAGGAGAAGTTTACAATGATACTTCCAAACTTTGGACGTGTTGCTAAGCTGCCTCTTTCTTTGAAGCATCTGACTGATGGATTCAAAGGGGGAAAGACATCAGAAGAGGATGATATTAACAAGCTCTTCTCTAATGTTTTGAGTGTACATCCACCAAAGGAGGAGAATTTACAGACAGTATTCAAAAAACAACTCGAGGAAGACAGGAAGATTGTGATATCACGTAGTAATTTGAATGAACTACGAAAGGTTCTTGAAGAACATCAGCTATCGTGCACAGACCTCTTGCATGTGAATACTGATGGCATCGTTATAACTAAGCAAAAAGCTGAGAAACTGGTAGGCTGGGCAAAAAATCATTACTTATCATCATGCCTGCTTCCTTCTATCAAAGGAGAAAGATTGTGCATACCTCGTGAAAGTCTTGAAATTGCAATCTCAAGGATGAAAGGCATGGAAACTATGTCACGAAAATCTTCTCAGAACCTCAAGAACCTTGCGAAGGATGAATTTGAGAGCAATTTCGTTTCAGCTGTTGTAGCTCCTGGTGAAATTGGGGTGAAGTTTGATGACATAGGCGCTCTTGAAGATGTTAAGAAGGCACTTCAGGAACTTGTTATTCTTCCAATGAGAAGACCTGAGCTTTTCTCTCATGGAAACTTGTTGCGGCCCTGCAAAGGAATCTTACTTTTTGGTCCTCCTGGAACTGGGAAAACCCTTCTGGCGAAGGCACTTGCAACAGAAGCTGGTGCAAATTTTATCAGTGTAACTGGTTCAACCCTTACTTCAAAGTGGTTTGGAGATGCTGAGAAACTAACGAAAGCGCTTTTCTCATTTGCCAGCAAGCTTGCACCTGTCATTATATTTGTTGATGAAGTAGACAGTTTGCTTGGGGCTCGAGGTGGTGCTCATGAGCATGAGGCCACTAGAAGAATGAGGAACGAGTTCATGGCAGCGTGGGATGGATTGAGGTCAAAAGAAAATCAAAGAATTCTCATTCTTGGTGCAACAAACCGTCCATTTGACCTTGATGATGCTGTTATTCGTCGTTTACCCAGAAGGATATATGTTGATTTACCAGATGTGGAGAATCGAATGAAGATTCTAAGAATATTTCTTGCAAAAGAAAATCTGAATCCTGATTTTCAGTATGACAAACTTGCTAGCTTGACTGAAGGATACTCTGGCAGTGATTTGAAGAACCTCTGTGTCGCTGCAGCATATAGACCTGTTCAAGAGCTCTTAGAGGAAGAAAAGAAGAGAGACAATGATACTACAACTTCTGTATTAAGGCCCCTTAATTTGGATGATTTCGTGCAAGCAAAATCCAAGGTGGGTCCATCTGTTGCCTATGATGCAACCAGCATGAATGAGTTAAGGAAGTGGAATGAAATGTACGGTGAAGGCGGTAGTAGAACAAAATCACCATTCGGATTTGGGGACCGATCTTGA 3054 0.4037 MYLRRIQCRDRRWALLLQPSKYFFRPKFSDHSLLPKTTVKEYSSHGGIIRRDVLGSDSSSHILSRHSFTGLNKRPSFCLRSSQIRTFSSESDGSGASENKQVHVNDGANFDKGKSQLDKSGQYVKCTNSHARLGELDQEEWLTNEKLAVESKKKESQFLTKKDRFKNEFLRRIVPWEKINISWDTFPYHIHEHTKNLLTECAASHLRHNKFASSYGIHLASSSGRILLQSIPGTELYRERVVRALAQDLQVPLLVLDSSVLAPYDIDDDQSSDSESDDDNAESGEEGSENEDDNDASNEEEWSSTEAKSDASDNEDDVVASAEAALKKVKDAVKKLIPYNVEELEKMVTGGDTRDDTAESSNSDDATSSDKSGSKLRKGARVKYIGPSIEFSDADDREISLSNGQKGEIYEVNGDRVAVIWDINEEKANENEVENLNNSRAKPSVYWINVKDIENDLDAQSHDCYIAVEALCEVLNSKRPLIVYFPDSSQWLHKSVPKSNRNEFFHKVEEMFDRLYGPVVLICGQNKVHSGSKEKEKFTMILPNFGRVAKLPLSLKHLTDGFKGGKTSEEDDINKLFSNVLSVHPPKEENLQTVFKKQLEEDRKIVISRSNLNELRKVLEEHQLSCTDLLHVNTDGIVITKQKAEKLVGWAKNHYLSSCLLPSIKGERLCIPRESLEIAISRMKGMETMSRKSSQNLKNLAKDEFESNFVSAVVAPGEIGVKFDDIGALEDVKKALQELVILPMRRPELFSHGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISVTGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAHEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDVENRMKILRIFLAKENLNPDFQYDKLASLTEGYSGSDLKNLCVAAAYRPVQELLEEEKKRDNDTTTSVLRPLNLDDFVQAKSKVGPSVAYDATSMNELRKWNEMYGEGGSRTKSPFGFGDRS* 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2303 1017 Pfam AAA+ lid domain 915 951 IPR041569 -
Mtr4g2303 1017 Pfam ATPase family associated with various cellular activities (AAA) 762 892 IPR003959 GO:0005524|GO:0016887
Mtr4g2303 1017 MobiDBLite consensus disorder prediction 268 300 - -
Mtr4g2303 1017 SMART AAA_5 758 895 IPR003593 -
Mtr4g2303 1017 MobiDBLite consensus disorder prediction 87 115 - -
Mtr4g2303 1017 Gene3D - 720 986 IPR027417 -
Mtr4g2303 1017 MobiDBLite consensus disorder prediction 301 316 - -
Mtr4g2303 1017 CDD AAA 727 893 - -
Mtr4g2303 1017 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1013 - -
Mtr4g2303 1017 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 1013 - -
Mtr4g2303 1017 Gene3D - 894 977 - -
Mtr4g2303 1017 MobiDBLite consensus disorder prediction 87 104 - -
Mtr4g2303 1017 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 721 986 IPR027417 -
Mtr4g2303 1017 ProSitePatterns AAA-protein family signature. 865 884 IPR003960 GO:0005524|GO:0016887
Mtr4g2303 1017 MobiDBLite consensus disorder prediction 348 379 - -
Mtr4g2303 1017 MobiDBLite consensus disorder prediction 265 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2303 Mtr-Chr4 36522472 36538517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2303 756 957 Calmodulin-binding Proteins AT3G56690 35.922 5.75e-32 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2303 - - mtr:MTR_4g074920 1663.66