Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2286 ATGATTCTTCAACAAGCTTCTCCTACTTTTCACTTCTCTCTTTGTCCCTGCAACAACAATTATGCTTCCAATTCTCTTCTTTCCTTTCCCCTTTCCAAAACCATGAAAAAGCGCTTATTTTCAAATCACTACTCATATCGCAAATTCCGTAGAAAAAAATGGACCCTTTATTCCTCTTCTATTCAAAAACAATCTGCAACTACTTCCAATCCCAAATTCGCTAATTCTTCTAAAAGGGGTGCGAAAAGTTTTGTTTTTGATGGCAGAATTTCAAATTCAAATGATGAACTTGAAGTTGAAGGTGGTGAAGTTGAATTAAGGGATTCGCAGGTTCAATTGGGTTCAAATTTTACTACTTTTCAAGAGGATCCAATTGTGGATAAGCTTAGAACTCAGTTGGGTGTGATTCACCCGATTCCATCGCCTCCTATTAACCGACACGTTGCTGGTTTGTTTGTGTTTTTTTTCTTTGTTGGTGTTGTTTTTGATAAATTATGGACTTTTAGAAGAAGGAGGAACAAAGTTAGTAGTGAAGATAGTTTTCGCGGTGTGTGGCCGCAGGTTCCTACTAGTTTTTCGTTGTTTTTGGAGAAGGATTTGCAGAGGAAAGAGTCAGTTGAATGGGTGAACATGGTGTTAGGGAAGTTGTGGAAGGTTTATAGAGGTGGACTTGAGAATTGGATTATTGGGTTACTTCAACCTGTTATTGATGATTTGAAGAAGCCTGATTATGTTGAAAGAGTTGAGATTAAGCAATTCTCATTAGGGGATGAACCTTTGTCTGTTAGGAATGTTGAACGTAGGACTTCCCGCCGTGTCAATGATTTACAGTACCAGATAGGCCTTAGGTATACTGGAGGTGCTCGCATGCTGTTAAGTCTTTCTCTTAAATTTGGCATTATTCCGATTGTTGTACCTGTTGGTGTTCGAGATTTTGACATTGATGGTGAACTTTGGGTAAAATTGAGATTAATACCAACAGCTCCTTGGGTCGGAGCTGCTTCATGGGCTTTTGTTTCACTTCCAAAGATCAAGTTTGAACTGTCTCCATTTCGTTTGTTCAACTTAATGGCAATTCCAGTTCTCTCGATGTTTTTGACCAAACTTCTTACAGTAGATTTACCTAGACTATTTGTACGGCCAAACAAAATTGTTTTGGATTTTGAGAAGGGAAAAGCTGTTGGTCCCGTCACTGTTGGTCCTGTCGTTGATGGTGTTAAATCTGGAGAAATGCAAGAAGGAAACATGGATTCTGTTGGTGAACTCTCCGTCACTCTTGTGGATGCTCGAAAGCTTCCTTATTTTTTTGGCAAGACAGATCCATATGTTATTCTTAGCCTTGGAGATCAAACCATACGCAGCAAAAAGAACAGTCAAACTACTGTCATTGGCGCCCCTGGAATGCCAATTTGGAATCAGGATTTCCATATGCTTGTTTCCAACCCTAAAAAGCAGAAGTTAAGTATCCAAGTTAAGGACGCTCTGGGATTTGCAGATTTGACCATTGGTACTGGAGAGGTTGATTTGGGATCTCTTCAAGACACTGTACCAACAGACAGAATTGTTGCTTTACAAGGGGGTTGGGTTTTTTTACGAAAGGGCTCGTCTGGGGAGATATTGCTTAGGCTAACATATAAAGCATATGTGGAGGATGAGGAAGATGACAAGACTGAGGAGGATTCCATTGATATAGATGTTTCAGACGATGAGTTGTCTGATACAGAAGAAGCAAATGTCACTGATAAGATGGGCGTAAGAGAATCTGCGTACCCAACAGATAAAGAATCATTTATGGATGTTTTGGCTGCAATAATTGTTAGCGAGGAATTCCAAGGGATAGTAGCATCTGAAACAGGGTTTACCAAAGGTTTGGATAATGGCTCAAATACAGGGTCTAAAGCATCAAAATCTCCTGTTGCCAATGCGGAATCAATTCCTCCTAGTGCTGATAATTCTGAAGGTTCTTCTGGAGGGTCGGCCTTATTTTGGCTTGCTGTGATTACTAGCATAGCAGTATTAATTGCTGTCAATATCAGTGGATCAAGTATCTTCAATCCTTAA 2061 0.3984 MILQQASPTFHFSLCPCNNNYASNSLLSFPLSKTMKKRLFSNHYSYRKFRRKKWTLYSSSIQKQSATTSNPKFANSSKRGAKSFVFDGRISNSNDELEVEGGEVELRDSQVQLGSNFTTFQEDPIVDKLRTQLGVIHPIPSPPINRHVAGLFVFFFFVGVVFDKLWTFRRRRNKVSSEDSFRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGLENWIIGLLQPVIDDLKKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLSLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTAPWVGAASWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTVDLPRLFVRPNKIVLDFEKGKAVGPVTVGPVVDGVKSGEMQEGNMDSVGELSVTLVDARKLPYFFGKTDPYVILSLGDQTIRSKKNSQTTVIGAPGMPIWNQDFHMLVSNPKKQKLSIQVKDALGFADLTIGTGEVDLGSLQDTVPTDRIVALQGGWVFLRKGSSGEILLRLTYKAYVEDEEDDKTEEDSIDIDVSDDELSDTEEANVTDKMGVRESAYPTDKESFMDVLAAIIVSEEFQGIVASETGFTKGLDNGSNTGSKASKSPVANAESIPPSADNSEGSSGGSALFWLAVITSIAVLIAVNISGSSIFNP* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2286 686 ProSiteProfiles C2 domain profile. 407 522 IPR000008 -
Mtr4g2286 686 MobiDBLite consensus disorder prediction 624 653 - -
Mtr4g2286 686 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 420 547 IPR035892 -
Mtr4g2286 686 Pfam C2 domain 420 517 IPR000008 -
Mtr4g2286 686 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 202 389 IPR031468 GO:0008289
Mtr4g2286 686 SMART C2_3c 421 521 IPR000008 -
Mtr4g2286 686 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 13 686 - -
Mtr4g2286 686 Gene3D C2 domain 404 548 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2286 Mtr-Chr4 36303470 36310678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2286 420 556 Acyl Lipid Metabolism Gene Families AT4G13550 30.000 4.47e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2286 - - adu:107477171 957.592