Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2283 ATGGCTTCTTCATACTCCGAGGGCTTGAAAACCTATGGCTCCTCCGCCCTCTCTGCCGAAGAAAAATACAATCAGAACCTCACATTGTCCAAGAGAAACCGCAGAATCTGCCTCGAAAGGCTTCCTAAACACAATGACAAATCTATGGCTACAGGTCGCATTAAACTACCGGATATGCTTGTAGAGCAATCTTGGTTGGAAGCATTACCTGGTGAATTTCAGAAACCTTACGCCCCGGCTCTTTGCATGTTCGTCCAAAATGAGATTTTCGCTTTCAAAGATTCCGTATATCCTCCTTCGCATTTGATTTTCAATGCTCTTAATACTACTCCTTTTCATTCCGTTAAGGCTGTGATTCTTGGCCAGGAACCTTATGATGGACCTGGTCAAGCAATGGGGCTTTCATATTCGGTTCCGGAGGGAGTTAAAGTTCCATCCATTTTGAAGAATGTATTTAAGGAGCTTAAGAAAGATATTGGTTGTTCCATTCCATCTCACGGCAATCTTGAAAAATGGGCTTTGCAGGGCGTTCTCTTGCTGAATGCTGTTCTCACAGGTAGGAAGAATGAAGATAATTTAAATTCACATGCAAATATAGGCTGGGAACAATTCACAGATGTTGTTATCAAGACGATCTCTGAGAAGAAGGAAGGGGTCGTGTTTCTGATGTGGGGAGAGTCTGCTCAGGAGAAAATTCGCTTAATTGATCAAACCAAGCATCACATTCTAAAAGCTGAACATCCCTCCGTGTTGACTGTGAAAAGAGGTTTCTTTGGCTGCAAGCACTTCTCTAAAACTAACCAACTTCTGGAGCAAAAGGGGTTTGATCCCATAGATTGGCAACTATAA 849 0.4264 MASSYSEGLKTYGSSALSAEEKYNQNLTLSKRNRRICLERLPKHNDKSMATGRIKLPDMLVEQSWLEALPGEFQKPYAPALCMFVQNEIFAFKDSVYPPSHLIFNALNTTPFHSVKAVILGQEPYDGPGQAMGLSYSVPEGVKVPSILKNVFKELKKDIGCSIPSHGNLEKWALQGVLLLNAVLTGRKNEDNLNSHANIGWEQFTDVVIKTISEKKEGVVFLMWGESAQEKIRLIDQTKHHILKAEHPSVLTVKRGFFGCKHFSKTNQLLEQKGFDPIDWQL* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2283 282 SMART UDG_2 108 270 IPR005122 -
Mtr4g2283 282 Hamap Uracil-DNA glycosylase [ung]. 62 281 IPR002043 GO:0004844|GO:0006281|GO:0006284
Mtr4g2283 282 Pfam Uracil DNA glycosylase superfamily 112 269 IPR005122 -
Mtr4g2283 282 CDD UDG-F1-like 77 280 IPR002043 GO:0004844|GO:0006281|GO:0006284
Mtr4g2283 282 Gene3D - 56 282 IPR036895 -
Mtr4g2283 282 TIGRFAM ung: uracil-DNA glycosylase 63 274 IPR002043 GO:0004844|GO:0006281|GO:0006284
Mtr4g2283 282 SUPERFAMILY Uracil-DNA glycosylase-like 60 282 IPR036895 -
Mtr4g2283 282 SMART UDG_2_a 108 270 - -
Mtr4g2283 282 PANTHER URACIL-DNA GLYCOSYLASE 26 282 IPR002043 GO:0004844|GO:0006281|GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2283 Mtr-Chr4 36267695 36269536 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2283 K03648 - gmx:100818241 374.4