Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2266 ATGAATATCATCCTTCTGATGTATGTCATCATACTCGCAGGTATTGAAGCTGAGGCATTATCTTATGATTACACTGCGAACATTGAATGTTTGACAATCCCACAGAAGCCTCAGTACAATGGAGGAATAATTCAAAACCCAGAAATAAATGATGGACTACAGGGATGGACATCATTTGGGGAATCAAAAATACAACATAGAGAATCATTAGGTAACAAATATGTGGTAGCTCATAGCAGAAATCAACCATATGATAGTGTCTCCCAAAAGATTCACCTTCAAAAGGGGATGTATTATACTTTATCTGCTTGGTTACAAGTGAGTAATGGAAATGTTCCTGTAACAGCAGTAGTTAAAACAAATGAAGGATTTAAATTTTGTGGTGTCATTTTTGCGGAATCTAACTGTTGGTCTATGCTTAAGGGTGGTTTCATAGCAGATACATCAGGGGAAGCTGAGCTCTACTTTGAGAGTAATAATACTTATGTGGAAATTTGGATAGACAGTGTATCCTTACAACCATTCACAGAACAACAATGGAAGTCGCATCAAGATCAAAGCATTGAAAAGGAACGAAAGAGAAAGGTATTAGTCCAAGCACTAGACGAACAAGGACACCCTTTACCAAATGCGAGCATATATATTACATTGAATAAACCAAAGTTTCCATTTGGAAGTGCAATAAATAGTAACATTATTAACAACCGTGCGTATCAAGATTGGTTCTCATCTAGGTTCACAGTTACAACATTTGAAAATGAAATGAAATGGTACACAAATGAATACGCACCAGGAAAAGATAACTATTTCCAAGCTGATCAAATGCTACAGTTTGCAAAATCACACAATATTACTGTTCGAGGACACAATATATTTAATGATGATCCTAAGTATCAACCAAAATGGGTTTATTCACTCTCCCCAAACCAGCTTAATTTAGCAGTCCAAAAAAGAATGAATTCCGTTGTGGGAAGATACAAGGGCCAAGTTATTGGTTGGGATGTTGTTAATGAAAATCTCCATTTCTCATTCTTTGAAGGTAAACTTGGACAAGATTTTTCAGCCAAAGCATTTAACAAGGTTCATAATATTGATCCACAAACGACCTTATTTATTAATGAGTTTAACACAATTGAGGATAGTAGAGATGGTTTATCATCTCCATCAAATTACATCCAGAAAATCAAACAAATTCAAAGTGTGAATAGGCAATTGCCGCTTGGAATTGGTCTGGAGTCTCATTTCTCTTCTCTCCCTCTCAACTTTCCTTACATGAGAGCTTCCATTGATACCCTTACTGCTTCTCGTTTGCCAATATGGATTACAGAATTAGATGTTGCAAGCCAACCTAATCAGGTACAATACTTGGAGCAAGCTCTTAGAGAGGCACACTCTCACCCAGGGGTTCAAGGTATTGTAATGTGGACAGCATGGACACCGCAGGGTTGCTATAAGATGTGTTTGACAGATAACAATTTCAAAAATTTACCAACAGGGGATGTTGTTGACAAACTAATATCTGAGTGGGGGAAAGCACAAGTTTTAGGGACGACAGACCAAAATGGACTACTTGAGTTGTCCCTTTTTCATGGAGATTACAAAATACAAATTAATCACCCTATCAAGAAGAATTACTCTATCATTCATCACATGCAAGTGCTTCCAAAAGAAGATTATTCCAATAAAACAACACAATTGATACAACTTCTTGTTTAG 1716 0.366 MNIILLMYVIILAGIEAEALSYDYTANIECLTIPQKPQYNGGIIQNPEINDGLQGWTSFGESKIQHRESLGNKYVVAHSRNQPYDSVSQKIHLQKGMYYTLSAWLQVSNGNVPVTAVVKTNEGFKFCGVIFAESNCWSMLKGGFIADTSGEAELYFESNNTYVEIWIDSVSLQPFTEQQWKSHQDQSIEKERKRKVLVQALDEQGHPLPNASIYITLNKPKFPFGSAINSNIINNRAYQDWFSSRFTVTTFENEMKWYTNEYAPGKDNYFQADQMLQFAKSHNITVRGHNIFNDDPKYQPKWVYSLSPNQLNLAVQKRMNSVVGRYKGQVIGWDVVNENLHFSFFEGKLGQDFSAKAFNKVHNIDPQTTLFINEFNTIEDSRDGLSSPSNYIQKIKQIQSVNRQLPLGIGLESHFSSLPLNFPYMRASIDTLTASRLPIWITELDVASQPNQVQYLEQALREAHSHPGVQGIVMWTAWTPQGCYKMCLTDNNFKNLPTGDVVDKLISEWGKAQVLGTTDQNGLLELSLFHGDYKIQINHPIKKNYSIIHHMQVLPKEDYSNKTTQLIQLLV* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2266 571 Gene3D Glycosidases 214 514 - -
Mtr4g2266 571 PANTHER GLYCOSYL HYDROLASE FAMILY 10 PROTEIN 10 564 - -
Mtr4g2266 571 Gene3D - 32 175 - -
Mtr4g2266 571 Pfam Glycosyl hydrolase family 10 218 475 IPR001000 GO:0004553|GO:0005975
Mtr4g2266 571 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 216 505 IPR001000 GO:0004553|GO:0005975
Mtr4g2266 571 Pfam Carbohydrate binding domain 42 159 IPR003305 GO:0016798
Mtr4g2266 571 PANTHER GLYCOSYL HYDROLASE 10 564 IPR044846 GO:0004553|GO:0005975
Mtr4g2266 571 SUPERFAMILY (Trans)glycosidases 207 510 IPR017853 -
Mtr4g2266 571 SUPERFAMILY Galactose-binding domain-like 40 173 IPR008979 -
Mtr4g2266 571 SMART glyco_10 255 505 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2266 Mtr-Chr4 36128634 36132662 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2266 15 571 Glycoside Hydrolase AT4G33840 55.694 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2266 - - gmx:100775272 836.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2266 4 36128634 36132662 Mtr4g2266 4 36128634 36132662 ECH