Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2263 ATGGCAACAAGAACCAAAGTTTGTATTTCTTTGATGTTATTTGCAGTGGCATTTATCAATGCAATAGATGAATGTTCAGATTTTACAATCGATGAATCCACCATAGAAGACATACAAGATGCCTTCACTCTAAACAAACTCACTTCAAGACAACTCGTTGACTTTTACTTGCACAGAATCAAGGTGCTGAATCCAATACTTGGTGCTGTATTGGAACTCAATCCTGACGCACGAGATCAAGCGGACAAGGCTGATTGCGAGAGACAAGAAGATCGTGACCGTTCGTTGCTTCATGGGATACCTGTTTTGATCAAAGACAGTATTGCAACTTTTGACAAACTAAATACAACAGCAGGTTCTTATGCATTGCTTGGATCAAAGGTTCCACGTGATGCACACGTGGTTTCGAAGCTAAGGGATGCTGGTGCCATTATTCTGGGGAAAACTAGTCTCCCAGAGTGGTATGGCGCTCGTTCTACCACCATGCCAAAAACTTGGTGCGCTAGAGGTGGATTTGCATTGAATCCTTATGTGGAGTCTAAGAGTCCATGTGGGTCTAGCTTTGGATCTGCAATTTCAGTGGCAACAAACATGGTTACAGTTTCATTAGGGACAGAAACTGATGGCTCCATTATCTGTCCAGCTGATCACAATTCAGTAGTGGGAATCAAGCCAACTGTTGGACTCAGTAGCAGGGCTGGTGTCATACCAATTTCACCTCGTCAAGATACCATCGGGCCAATTTGCAGGACAGTTTCAGATGCAGTTCATGTGCTTGATGTAATTGTTGGATTTGACACAAGAGATTATGAAGCTACAAAGTCAGCAGCCAAGTTTATACCTTCAGGTGGTTATAAGCAATTCCTCAATAAACAAGGTCTCAAAGGAAAGAAAATAGGTGTTTTGAGGAATCCATTTTTGATTCCTTATGAGGGATCCAAAGTCATTTCCATCTTTGAGGATCATCTCAATCTGTTGAGAGAAAGAGGTGCAAAAGTTGTGGAAAATTTGGAAGTAGAAAATTTAAGTATCATTCTAGACCCTTTTCAAAATGGTGAAATGATAACCTTTCTTCCAGAATTCAAGTTGTCCATTAACAAATATCTACAGGAGCTCACTTATTCTCCCGTGAGGTCTCTAGCTGAGATTATAGAATTCAACATCAATAACCCTAAATTAGAAAAGACTAATGAATATGGGCAAGATTTATTTATTGCTTCAGAAATGACGAGCGGATTCGGAAAAAGTGAAATTGAGGCACTGAAGATGATGGATCAATTGTCAAAAGATGGGTTTGAGAGTTTGATAAAGAAGAATCAATTGGATGCAGTGTTGGCCATAGGCTCTGATGCTTCTCCAATGTTGGCAATTGGAGGGTATCCAGCAATCACTGTCCCAGCTGGATATGATAAGCAAGGGATGCCATTTGGAATCTGTTTTGGAGGGTTAAAGGGAACTGAGCCGAAACTGATTGAGATTGCTTATGATTTTGAGCAAGCTACCAGGGCAAGGAAGCCACCCCTCGCTTAG 1530 0.4105 MATRTKVCISLMLFAVAFINAIDECSDFTIDESTIEDIQDAFTLNKLTSRQLVDFYLHRIKVLNPILGAVLELNPDARDQADKADCERQEDRDRSLLHGIPVLIKDSIATFDKLNTTAGSYALLGSKVPRDAHVVSKLRDAGAIILGKTSLPEWYGARSTTMPKTWCARGGFALNPYVESKSPCGSSFGSAISVATNMVTVSLGTETDGSIICPADHNSVVGIKPTVGLSSRAGVIPISPRQDTIGPICRTVSDAVHVLDVIVGFDTRDYEATKSAAKFIPSGGYKQFLNKQGLKGKKIGVLRNPFLIPYEGSKVISIFEDHLNLLRERGAKVVENLEVENLSIILDPFQNGEMITFLPEFKLSINKYLQELTYSPVRSLAEIIEFNINNPKLEKTNEYGQDLFIASEMTSGFGKSEIEALKMMDQLSKDGFESLIKKNQLDAVLAIGSDASPMLAIGGYPAITVPAGYDKQGMPFGICFGGLKGTEPKLIEIAYDFEQATRARKPPLA* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2263 509 PANTHER AMIDASE 6 508 - -
Mtr4g2263 509 SUPERFAMILY Amidase signature (AS) enzymes 30 507 IPR036928 -
Mtr4g2263 509 PANTHER C869.01-LIKE PROTEIN, PUTATIVE-RELATED 6 508 - -
Mtr4g2263 509 Pfam Amidase 52 490 IPR023631 -
Mtr4g2263 509 Gene3D Amidase signature (AS) domain 17 508 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2263 Mtr-Chr4 36105878 36108799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2263 46 276 Acyl Lipid Metabolism Gene Families AT5G07360 33.190 4.29e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2263 K01426 - qsu:112018080 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2263 4 36105878 36108799 Mtr4g2263 4 36105878 36108799 ECH