Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2259 ATGTTAAAGAAAATGGGTTCTCAGGTGTCGAAACAAATCGAAAAACGAAAAACAATCCAAACAGAAGAGAAAACTCTATCTGATCTAAAAAGCTTAGGAGAAAACTACCCTGGTTGTGATTACCACCCATCAGACAGAAAAAACTGGATGGCAAATCTCAACCCTGACAAACTTAAGATCAAAATGATTGTTTGGCCTGGAACACATGATTCTGCAACGGACAAAATCGGCATACCAGGAATCTCTCGTCCTTTCGCACAATGCCAAACCTTATCCATCTATAATCAGCTTGTAAGAGGAACACGGGTGTTCGACATTCGCGTGCAAGAGGATCGAAGAGTATGTCACGGAATTCTCCTCACGTACAGCGTAGACGTTGTCATAAAAGACATAAAAAAGTTCTTATCAGAAACCGTATCCGAAATCATAATCCTCGAGGTTAGAACTGAGTTTGGTCACAATGATCCACCCGAATTCGACAAGTACCTCGAAGAAAACTTAGGCGAGTACTTGGTTCACCAAGATGATAATGTTTTTGATAAGACTATTGCAGAGGTGCTACCAAAAAGAGTTATATGCGTTTGGAAGCCGAGAAATTCGACACAACCGAAGGCAAAGAGTAGTCTTTGGAGTGCAGGGTATCTAAGGGACAATTGGATTAACACAGATTTGCCATTAACAAAGTTTGAGAGTAATATGAAGTATTTGAGCCAACAGGAACATGTTGTGTCTAGAAAATACTTTTATAGAGTTGAGAATACTGTTACGCCTGTTCCTGATAACCCTGTTTTATGCGTGAAACCTGTGACAGAACGCATTCATAGATATGCAAGATTCTTCATTAGTCAGTGCTTTTCTAAAGGGTGTGGTGATAAGTTGCAGATATTTTCTACGGATTTTATAGACTTAGATTTTGTTGATGCATGTGTTGGACTCACCCATGCAAGGGTTGAGGGTAAAGCATGA 966 0.3986 MLKKMGSQVSKQIEKRKTIQTEEKTLSDLKSLGENYPGCDYHPSDRKNWMANLNPDKLKIKMIVWPGTHDSATDKIGIPGISRPFAQCQTLSIYNQLVRGTRVFDIRVQEDRRVCHGILLTYSVDVVIKDIKKFLSETVSEIIILEVRTEFGHNDPPEFDKYLEENLGEYLVHQDDNVFDKTIAEVLPKRVICVWKPRNSTQPKAKSSLWSAGYLRDNWINTDLPLTKFESNMKYLSQQEHVVSRKYFYRVENTVTPVPDNPVLCVKPVTERIHRYARFFISQCFSKGCGDKLQIFSTDFIDLDFVDACVGLTHARVEGKA* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2259 321 SUPERFAMILY PLC-like phosphodiesterases 45 312 IPR017946 GO:0006629|GO:0008081
Mtr4g2259 321 Gene3D Phosphatidylinositol (PI) phosphodiesterase 45 313 IPR017946 GO:0006629|GO:0008081
Mtr4g2259 321 PANTHER 1-PHOSPHATIDYLINOSITOL PHOSPHODIESTERASE-LIKE PROTEIN 11 318 - -
Mtr4g2259 321 SMART plcx_3 66 196 IPR000909 -
Mtr4g2259 321 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 66 188 - -
Mtr4g2259 321 Pfam Phosphatidylinositol-specific phospholipase C, X domain 85 178 IPR000909 -
Mtr4g2259 321 PANTHER UNCHARACTERIZED 11 318 - -
Mtr4g2259 321 CDD PI-PLCXDc_plant 36 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2259 Mtr-Chr4 36072654 36073817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2259 5 321 Acyl Lipid Metabolism Gene Families AT4G38690 74.843 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2259 - - lja:Lj3g3v3500050.1 555.829