Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2256 ATGAGACAGAACAGAATTGTAAACAATCACCAAAACATCATTTTTCCTCTTACACATATGGCAGATAGCGTGGTAGCGTTCCTTTTGGAACATTTATCACAATTGTTGCAACACGAAGCTAATTTGCTGTGTGGAGTGCAAGACAGAATCATATCCCTCCGCAACGAACTCGAAATCATAAACGCATACCTGAAAACTTCCTCTAGAGGGAACAGGAACAACAACAAAGAAATAGAGCAAAAGGTTCTGAGTCAGATCAGAGATGTCGCTCATGTAGCTGAGGATGTCATCGACACATTCATCGCCAACATTGCCATGTACAAGAAGAGAAACATGCTGGGAAGAATGCTTCACAGCGTCGACCATGCAAAGTTGCTTCACGACGTAGCAGAGAAAATTGACAAGATCAAAACAACACTAAACGAGATACACGAAAACAGGATCAAATACTATCAAGAAAGCAGTGATCAATCATCGTCAGCAAGAGAAGAGGAAGAGAGGATACAATCACTGCACAGATTAAGAAGAAACGTCGAGGAGGAAAATGTAGTTGGCTTTGTCCATGAGTCTGAGGTAGTCATCAATAGACTCATAGTGGATGATTCCTCTTCACCGCGTCTCAAAGTTGTTTCAATCATTGGTATGGGTGGATTGGGGAAGACAACCCTTGCAAGAAAGATCTACAACAGTGAAGAGGTGAAGAACCACTTCGATTGCCGTGCATGGGTTTACGTTTCAAATGAGTGTAGATCACGAGAACTTTTGCTTGGACTTCTTCAAAATTTGATGCCCAACCATATTAATAATGATTGTAGAAGCAGCAGCAGCAACATCAAAAAGAAGGGTAAAAAGAAGCACAAGGAAGGTGTGAATAATTCTCAAGACATCTCTAGCTTAAGTAATGATGAGCTGAAGAAAAAAGTTTGGGAATGCTTCAAGTGGAAAAAGTATTTGCTGGTTCTTGATGACTTGTGGAAAATACAAGATTGGGATGAGGTAAAAGATGCTTTTCCTGATGGAAACAGAGGAAGCAGAATATTGATAACTAGTCGTTTGAAAGAAGTTGCCTCGCATACTGGCCGAGATCCTCCTTATTGTCTTCAATTTCTCACTGAAGAACACAGTTGGGAGCTCTTCTCCAAAAAAGTGTTTAGAGGAGAAAAGTACCCTTGTGATCTTGAATCTTTAGGTAAACAAATAGTTAAAAGTTGTGGCGGTTTGCCACTCTCAATCTTGGTGTTGGCAGGGCTTTTGGCAAATAAGGAAAAGTCACACAGGGAATGGTCGAAACTGCTGGGTCATGTCAATTGGTATCTTACTCGAGACGAGACTCAAGTCAAGGATATAGTACTTAAACTCAGTTTCAACGACTTGCCTTCAAGATTGAAACCATGCTTTCTGTATCTAGGGATATTTCCTGAAGATTATGAAATATGTGTAAGGCAATTGTTGCAACTATGGGTTGCTGAGGGATTTATTCAAGAAACGGGAAATAGAGATCCAAATGATGTTGCTGAAGACTACTTGTATGAGCTCATTGATCGTAGTTTGATCCAAGTAGCACAAGTGAAGGATAGTGGAGGAGTAAAAACATGTCGCATCCATGATCTTCTTAGAGATCTCTGCATATTAGAGAGCAAAGAGGACAAAATCTTTCAAATTTGTACAGATAGCAATATTTTAATCCCTACAAAACCTCGCAGATTGTCGGTCCATTCCACCATGTCTCACTATGTTTCTTCAAGCACCAACGATCATTCATGTGTTCGTTCTTTGTTTTGCTCTGACCCGAATTGCTTTGTGTATAGCGACGAGTGGAAATGGCTTACCAAAGGCTTCAAATTGGTTCGTGTGTTGGATCTCGATGGAAAGTATTGTTTTAAGATTCCTTCAAACTTAGGAAATTTTGTCCACTTGAGGTACTTAAGAATAGACTCGCATTATATTAGAAGTGTTCCGGATTCTATTTGCAGCCTTCAAAATCTACAAACATTATACTTAGGACCTTCAATCAGAGTCACCACAATTTCTTTCCCCTGTGGAATAACAAAGCTCAAGCATATAAGACATTTGTATACTTGTGGTCCTATCAAGCTACGTGGTGATTGTTCGGAATCAAATGGGGATGCTATGTGGAATCTGCAAACCATCTCTTCCATTGTACTCGATAAAAGAACAACATATCTCATAGAGAAAGGAAGTTTCCCCAAACTAAGAAAATTATGCTTGCAAATCTCCTCAAACTTTAAGGGCGATGTGCCCAAAATGTTGATAAGCCTACAACATTTGAGGCATTTGAATAAGCTAGAAATCTACTTTCAGGTGAAAGATTGGCCACACTCGCGATGGGAGATCAATTGTAAGGCCGAGGAAGTGTTACAAAGTCTGAAACATTTGCGACACCTAAGTATACTAAAAATTAGGAATGCCCTCGACCTTTTTACTTGTGTGGCCATGTTTCCTCCTAATATCACCAAGTTAACATTGTCATGCATTAGTTGCTTGAATGATGACGGGATAAATGCTATTGGAAATCTTACCAAACTCCAAATTTTGATCTTAACAGGAGACAATTGGTTTTTAGATTTTTGGCCTTCAGATTCACTGTTTGATATTAATTGTATTGAAGATGGGTTCCCACAATTGAAGGAGTTTCAGATGGGAAATTTGCCTGTTCGAAACTGGAAATTAGCCAATGGTTCGATGTCACGCCTTCAAATCCTTGTTATTCATCACTGTGATAAGTTTGATAGCTTGCCAAGTGAATTGTGGTCTTTGACTACCTTAAGAAAAGTCTGTGTTCGGAAACCCTCCGATGCAATGGCTGCAATGCTGCAAAATTTGGAAGTTAAGAATGGATGTGAGCTCATTGTAGAATAA 2880 0.3951 MRQNRIVNNHQNIIFPLTHMADSVVAFLLEHLSQLLQHEANLLCGVQDRIISLRNELEIINAYLKTSSRGNRNNNKEIEQKVLSQIRDVAHVAEDVIDTFIANIAMYKKRNMLGRMLHSVDHAKLLHDVAEKIDKIKTTLNEIHENRIKYYQESSDQSSSAREEEERIQSLHRLRRNVEEENVVGFVHESEVVINRLIVDDSSSPRLKVVSIIGMGGLGKTTLARKIYNSEEVKNHFDCRAWVYVSNECRSRELLLGLLQNLMPNHINNDCRSSSSNIKKKGKKKHKEGVNNSQDISSLSNDELKKKVWECFKWKKYLLVLDDLWKIQDWDEVKDAFPDGNRGSRILITSRLKEVASHTGRDPPYCLQFLTEEHSWELFSKKVFRGEKYPCDLESLGKQIVKSCGGLPLSILVLAGLLANKEKSHREWSKLLGHVNWYLTRDETQVKDIVLKLSFNDLPSRLKPCFLYLGIFPEDYEICVRQLLQLWVAEGFIQETGNRDPNDVAEDYLYELIDRSLIQVAQVKDSGGVKTCRIHDLLRDLCILESKEDKIFQICTDSNILIPTKPRRLSVHSTMSHYVSSSTNDHSCVRSLFCSDPNCFVYSDEWKWLTKGFKLVRVLDLDGKYCFKIPSNLGNFVHLRYLRIDSHYIRSVPDSICSLQNLQTLYLGPSIRVTTISFPCGITKLKHIRHLYTCGPIKLRGDCSESNGDAMWNLQTISSIVLDKRTTYLIEKGSFPKLRKLCLQISSNFKGDVPKMLISLQHLRHLNKLEIYFQVKDWPHSRWEINCKAEEVLQSLKHLRHLSILKIRNALDLFTCVAMFPPNITKLTLSCISCLNDDGINAIGNLTKLQILILTGDNWFLDFWPSDSLFDINCIEDGFPQLKEFQMGNLPVRNWKLANGSMSRLQILVIHHCDKFDSLPSELWSLTTLRKVCVRKPSDAMAAMLQNLEVKNGCELIVE* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2256 959 SUPERFAMILY L domain-like 524 930 - -
Mtr4g2256 959 Pfam NB-ARC domain 192 437 IPR002182 GO:0043531
Mtr4g2256 959 Pfam Rx N-terminal domain 24 104 IPR041118 -
Mtr4g2256 959 MobiDBLite consensus disorder prediction 270 296 - -
Mtr4g2256 959 Gene3D - 24 130 - -
Mtr4g2256 959 Gene3D - 455 544 IPR036388 -
Mtr4g2256 959 PRINTS Disease resistance protein signature 209 224 - -
Mtr4g2256 959 PRINTS Disease resistance protein signature 404 418 - -
Mtr4g2256 959 PRINTS Disease resistance protein signature 900 916 - -
Mtr4g2256 959 PANTHER - 72 957 - -
Mtr4g2256 959 Gene3D - 369 454 IPR042197 -
Mtr4g2256 959 CDD RX-CC_like 21 143 IPR038005 -
Mtr4g2256 959 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 469 IPR027417 -
Mtr4g2256 959 Coils Coil 161 181 - -
Mtr4g2256 959 Gene3D - 165 362 IPR027417 -
Mtr4g2256 959 PANTHER DISEASE RESISTANCE PROTEIN RP 72 957 IPR044974 GO:0006952
Mtr4g2256 959 Gene3D Ribonuclease Inhibitor 555 954 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2256 Mtr-Chr4 36019918 36022950 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2256 - - gmx:100814688 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2256 4 36019918 36022950 Mtr4g2256 4 36019918 36022950 ECH