Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2249 ATGGATCTATTATCCTCAACTTACATCACTCTCTTTACTCTTCTTTTCTTCACTCCCAAAGGTATCACTGGTTCAACCTTCACATTTGTGAACAAATGTGACTACACAGTATGGCCAGGTATTCTAGCAAATGCTGGTAGCCCAACACTTGGAAGCACCGGTTTCGAGCTTCCACAAGAAACCACTCGCACTTTTCAAGCTCCAGCCGGTTGGTCTGGCCGGTTCTGGGCTCGAACCGGTTGCAACTTCGACGGATCCGGCACCGGTTCATGTCTCACCGGAGACTGTGGCTCAAACATGGTAGAATGCAACGGTGCCGGAGCTGCACCTCCAGCAACCCTAGCAGAGTTCACTCTTGGAACTATAGGACAAGATTTCTACGACGTGAGTCTCGTCGACGGTTACAATCTTCCGATGATAGTTGAAGGCTCCGGTGGGTCGGGTATGTGTGAGTCCACCGGGTGTACTTCCGATCTGAACCAGCAATGTCCAGCGGAGTTGAGAGCTTCAGATGGAAGCGCGTGTAAGAGCGCGTGTGAGGCTTTTGGTAGTCCTGAGTATTGTTGTAGTGGCGCGTATGGTTCACCGGCGACTTGTAGACCGTCGATTTACTCGGAAATGTTTAAAAATGCTTGCCCTAGATCGTATAGCTACGCTTATGATGATGCTTCGAGTACTTTTACTTGTACTGCTGCGGATTATACCGTTACCTTTTGTCCATCTTCTCCAAGTAAAAAATCATCACAATATCCAACTACTCCAATGACCTCAGGAGCAGGGACAGTGATAGGGACTCCTGAGGTTGGAACAGGATCTGAAAATGGAGTTCAATACACGGGTACAGACACACCCATTGGGTATTCAGTTCCCGTTAATTCCGGGTCCGGATCAGTATCTAATTCAGGATCAGGAGGAGAAACCATGCTTGCAGATGGATCATATTTAGCTGGATTAGCCATGGGAGACTCCTCTACAACAACTTCATCTGCATTTGTTTACTCTTTTGGCTTTTTTCTCGTTTTCTTCTTGCTTTAG 1035 0.4744 MDLLSSTYITLFTLLFFTPKGITGSTFTFVNKCDYTVWPGILANAGSPTLGSTGFELPQETTRTFQAPAGWSGRFWARTGCNFDGSGTGSCLTGDCGSNMVECNGAGAAPPATLAEFTLGTIGQDFYDVSLVDGYNLPMIVEGSGGSGMCESTGCTSDLNQQCPAELRASDGSACKSACEAFGSPEYCCSGAYGSPATCRPSIYSEMFKNACPRSYSYAYDDASSTFTCTAADYTVTFCPSSPSKKSSQYPTTPMTSGAGTVIGTPEVGTGSENGVQYTGTDTPIGYSVPVNSGSGSVSNSGSGGETMLADGSYLAGLAMGDSSTTTSSAFVYSFGFFLVFFLL* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2249 344 SUPERFAMILY Osmotin, thaumatin-like protein 26 241 IPR037176 -
Mtr4g2249 344 Pfam Thaumatin family 31 240 IPR001938 -
Mtr4g2249 344 PANTHER OS03G0233200 PROTEIN 6 265 IPR001938 -
Mtr4g2249 344 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 6 265 - -
Mtr4g2249 344 CDD TLP-PA 26 239 - -
Mtr4g2249 344 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Mtr4g2249 344 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Mtr4g2249 344 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Mtr4g2249 344 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Mtr4g2249 344 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Mtr4g2249 344 ProSiteProfiles Thaumatin family profile. 24 240 IPR001938 -
Mtr4g2249 344 SMART tha2 27 240 IPR001938 -
Mtr4g2249 344 Gene3D Thaumatin 25 240 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2249 Mtr-Chr4 35954665 35957096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2249 11 248 Receptor kinase-like Gene Family AT5G38280 47.059 3.23e-75 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2249 - - cam:101493007 556.984