Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2244 ATGGATGATCCAAACAACAAAGACTCTTCATCTTCATCATCTTTATTATCACAACCTTTCTTACCAAAACCCTCAATAATCACAACATACCCAACACTAGAAGACCAAGATTCAAACCAAGAATCTGACTCAAATCAACAATACCTTCACATCACATACAATCATGGTCCACGTTCCTTCAAAGACTTACCTTTTCTCATCCTCTTTCTTCTCTTCGTTCTCTCCACTTTCGCCTTTGGAATCTTCTCAATCTTCCATAGAAACAACAATTACTCAACTCTTAATTCTTATACCTATGACACCAGCACAACCTCTTGCATCAACCCTTCATTTTCATCCAATTTTTTCACCAATAATTTTCTCTCTTTATCATCACCTTTTGTGAAAGATTTAATATGGACACTTGTTATCACGTTGATTTTGAGCTTACCCATTTGCTGGTTGTTGCTTCTTTTATTGAAGCATTACACCAAACACCTTGTCTACGCTTCGATACCGTTTTTTATTCTCATACCAATTTTTCTCAATGTTTACTGGTTTGTTGCTTGCACTATTAAGACTTCATGTAGTGAAAATTTTCCTATGGTGTATAGAATTTTGGTGTTGGTTTTTGTTTTTTTGGTGATTGGTGTGATTGTGTGGATTCTTGTGATAAATTGGCACCGTGTGGAGCTTACTGTGAGTATAATTGGGGTTGCTTCCGATGCGCTTTCGTGGAATATGGGTTTGTTTGGGGTGCTTCCTTGTTTGACAATTGGGCTTGTTGTGTATTACGTGCCGATTGTGGTTTTTCTGGTGTTTGCTAAGTATAATGGGAAGGTTGTTCCTAAGAAATTGCATAGTGAATATGAATGTGTTTGGAAGGAGGATTCTTGGGTGCCTGCTTATTTTGCATTGGCAATACTTACTATGTTGTGGTCAGCTGCAGCTATGCTTGAAGCTCAGGTTTATGTTATTAGCGGGACTATTGCTCGATGGTATTTCACTAAGGATTTTGAGGCTCCTACAAAGAGTATTAGAACTTCTCTCAGAAATGCTTTCGGTCCTTCTTCTGGAACAATATGTTTGTCGGGATTGCTTATCTTTGTTGTTCGAGTGGTGCGTTCTGTCGTTGATAATGCAAGACAAGAGGCTGCTCCCGGACTAGTGAACATTGTATTGCGGTGCTGCGTAAATGCCTTACTGACAGCTGTTGATTTTCTTAATAAGTTTACTATCAACTTTGCTGCAATAACCGGTGAAGCTTACTGCTCATCTGCAAGAATGACATATGAACTTCTAAGACGTAATCTTCTCTCTGCTGTTTTTGTGGAGACCATATCATCTCGCCTTCTGGTTGGAATTGTTTTTGTCCTGTCAGCAATATACACAATTGTGGTCTGTGTTATCTTAAAAGCTGCGACCAATCTCGGGTCTGATGCATATTTTGTGGCAGCGGCAGCATGGCTACTACTGATAATAGTGCTGGGTTTCCTTGTGCATGTGCTCGACATTGTAATTGACACAATTTATGTCTGTTATGCCATAGACAGAGACAGAGGAGAGGTTTGTAAGCAAGATGTTCACGAGGTTTACGTTCACCTTCCCATAAGTAGAAGTCTCAGACAATCTAATATTACAAGAACTTTAGGTGTATAA 1638 0.3907 MDDPNNKDSSSSSSLLSQPFLPKPSIITTYPTLEDQDSNQESDSNQQYLHITYNHGPRSFKDLPFLILFLLFVLSTFAFGIFSIFHRNNNYSTLNSYTYDTSTTSCINPSFSSNFFTNNFLSLSSPFVKDLIWTLVITLILSLPICWLLLLLLKHYTKHLVYASIPFFILIPIFLNVYWFVACTIKTSCSENFPMVYRILVLVFVFLVIGVIVWILVINWHRVELTVSIIGVASDALSWNMGLFGVLPCLTIGLVVYYVPIVVFLVFAKYNGKVVPKKLHSEYECVWKEDSWVPAYFALAILTMLWSAAAMLEAQVYVISGTIARWYFTKDFEAPTKSIRTSLRNAFGPSSGTICLSGLLIFVVRVVRSVVDNARQEAAPGLVNIVLRCCVNALLTAVDFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRLLVGIVFVLSAIYTIVVCVILKAATNLGSDAYFVAAAAWLLLIIVLGFLVHVLDIVIDTIYVCYAIDRDRGEVCKQDVHEVYVHLPISRSLRQSNITRTLGV* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2244 545 Pfam Plasma-membrane choline transporter 204 512 IPR007603 GO:0022857|GO:0055085
Mtr4g2244 545 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 48 526 IPR007603 GO:0022857|GO:0055085
Mtr4g2244 545 MobiDBLite consensus disorder prediction 7 26 - -
Mtr4g2244 545 PANTHER CTL-LIKE PROTEIN DDB_G0288717 48 526 - -
Mtr4g2244 545 MobiDBLite consensus disorder prediction 1 26 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2244 - - gmx:100810591 740.725