Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2243 ATGGCTATGGCTTTCAAAATGGCTACTACTGGGATGTGGGTAACTGATGAGTGCAAAAACTCTTTCATGGAGATGAAGTGGAAGAAGGTGCATAGGTACATAGTTTTCAAGATCGATGAAAAAACAAGGCTTGTGACCGTTGACAAGGTTGGTGGTCCTGGAGAAAACTATGATGATCTAGCTGCTTCTTTGCCTAATGATGATTGTAGATATGCTGTCTTTGATTTTGATTTTGTCACTGTTGACAACTGCCGTAAGAGCAAGATCTTCTTCATTGCATGGTCACCAACAGCATCAAGAATAAGAGAAAAGATACTATACGCAACATCAAAGGATGGGCTAAGAAGAGCTTTGGATGGAATCTCATATGAACTTCAAGCAACCGATCCAACTGAGATGGGATTCGATGTAATTCAAGACAGAGCCAAATAG 432 0.4051 MAMAFKMATTGMWVTDECKNSFMEMKWKKVHRYIVFKIDEKTRLVTVDKVGGPGENYDDLAASLPNDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIREKILYATSKDGLRRALDGISYELQATDPTEMGFDVIQDRAK* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2243 143 CDD ADF_cofilin_like 10 142 IPR017904 GO:0015629|GO:0030042
Mtr4g2243 143 Gene3D Severin 2 143 IPR029006 -
Mtr4g2243 143 SMART adf_2 16 143 IPR002108 GO:0003779
Mtr4g2243 143 Pfam Cofilin/tropomyosin-type actin-binding protein 18 140 IPR002108 GO:0003779
Mtr4g2243 143 SUPERFAMILY Actin depolymerizing proteins 6 141 - -
Mtr4g2243 143 PANTHER COFILIN-RELATED 5 143 IPR017904 GO:0015629|GO:0030042
Mtr4g2243 143 PANTHER ACTIN DEPOLYMERIZING FACTOR 5-RELATED 5 143 - -
Mtr4g2243 143 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2243 Mtr-Chr4 35880467 35881903 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2243 K05765 - gmx:100801857 283.493