Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2189 ATGGGTTTTCGTTTTGCTGGTATCATCAGAAAGGCATCATTTTCTGCAAACCGATCAGCTTCGAAAGCTGTGGACGTGCCAAAGGGATATCTTGCAGTATATGTTGGAGAGAAACAAAAGCGGTATGTGATCCCAATATCATACTTGAACCAACCATCATTTCAAGACTTATTGAGTCAATTTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACCATTCCTTGCACCGAGGATGTATTTCAACATATGACATCTCGCTTGAATGGCCTATGA 282 0.422 MGFRFAGIIRKASFSANRSASKAVDVPKGYLAVYVGEKQKRYVIPISYLNQPSFQDLLSQFEEEFGYDHPMGGLTIPCTEDVFQHMTSRLNGL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2189 93 Pfam Auxin responsive protein 13 89 IPR003676 GO:0009733
Mtr4g2189 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 91 IPR003676 GO:0009733
Mtr4g2189 93 PANTHER AUXIN-INDUCED PROTEIN 6B 6 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2189 Mtr-Chr4 35402226 35403055 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2189 25 86 Calmodulin-binding Proteins AT3G43120 51.613 5.42e-18 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2189 K14488 - gmx:100816803 156.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2189 4 35402226 35403055 Mtr4g2189 4 35402226 35403055 ECH