Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2182 ATGCTCAACACCTCATCTTCCAAAAATCACGATCAAGATCAGTCTCAATTAAGTGGTCCCACCCCTAATTCTCACCCAATCAAAATGGGCAAATCCGAAGACAATGATAAGAAGAACTCGGGTAAGAAACTCAAAGATGTAGAAATTAGTGTTCCAATAGTATACGGGAACGTATCATTTTGGCTTGGCAAAAAAGCTAGTGAGTATCAATCACATAAATGGACTATATATGTTCGTGGAGCATCCAACGAGGATCTGGGGGTTATTGTAAAGCGTGTTGTTTTTCAGTTACATACTAGTTTCAATAATCCCACAAGGATTGTGGATGCACCTCCTTTTGAGTTGTCAGAGGCAGGATGGGGAGAATTTGAAATTGCCATCACACTTTATTTTCACAGCGATGTTTGCGACAAGCCTGTGAACTTATATCATCAGTTGAGGTTGTATCCAGATGATGAAAGCAGTTCCTATTCCACAAAGAAGCCTGTTGTTGTGGAATTTTATGATGAGGTAGTTTTCCCCGACCCCTCTGAAGCTTTTTTAGCTCGTCTGCAGAATCACCCAGTTGTGAACATGCCAAGACTACCTGCTGGGCTTACCTTGCCTCCTCCTATTCCGATCGAAGATGCTAGTAAACGGAGGAGAGGTGACACTAAAGATAATCCCTTAAGCCAATGGTTCCTGAATTTCTCAGAAGCAGATGAACTCTTGCAGCTGGCAGCAGCTCGTCAGCAGGTTCAAGCTCATATTTCAAAACTCAAACGACAGATTAGTTTGATCGATGGACAGCATAAGCAGCTTAAATCTTCTCCTGACCAATAG 822 0.4221 MLNTSSSKNHDQDQSQLSGPTPNSHPIKMGKSEDNDKKNSGKKLKDVEISVPIVYGNVSFWLGKKASEYQSHKWTIYVRGASNEDLGVIVKRVVFQLHTSFNNPTRIVDAPPFELSEAGWGEFEIAITLYFHSDVCDKPVNLYHQLRLYPDDESSSYSTKKPVVVEFYDEVVFPDPSEAFLARLQNHPVVNMPRLPAGLTLPPPIPIEDASKRRRGDTKDNPLSQWFLNFSEADELLQLAAARQQVQAHISKLKRQISLIDGQHKQLKSSPDQ* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2182 273 Coils Coil 236 256 - -
Mtr4g2182 273 Pfam YEATS family 71 150 IPR005033 GO:0006355
Mtr4g2182 273 ProSiteProfiles YEATS domain profile. 43 187 IPR005033 GO:0006355
Mtr4g2182 273 MobiDBLite consensus disorder prediction 1 25 - -
Mtr4g2182 273 MobiDBLite consensus disorder prediction 29 43 - -
Mtr4g2182 273 PANTHER YEATS DOMAIN 16 271 IPR005033 GO:0006355
Mtr4g2182 273 CDD YEATS_TFIID14_like 49 180 - -
Mtr4g2182 273 MobiDBLite consensus disorder prediction 1 43 - -
Mtr4g2182 273 Gene3D YEATS domain 44 196 IPR038704 -
Mtr4g2182 273 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B 16 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2182 Mtr-Chr4 35378762 35383617 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2182 K11341 - gmx:100790602 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2182 4 35378762 35383617 Mtr4g2182 4 35378762 35383617 ECH