Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2171 ATGGCTGAGGGAGAAGCAACAGTTCTGAAATCTCTTGAAGATTTTGGTCCTCAAAAAAAGCTCAAAAGGAACAAGTTTGCTTGTGCTTGTGCTATCTTGGCTTCTATGACTTCTATCCTACTTGGATATGATATTGGTGTGATGAGTGGAGCAGCCATCTATATAAAAAGAGACCTTAAAGTAACAGACGTGCAAATTGAAATTCTCCTAGGTATCATAAACCTATATTCTCCCATAGGTTCTTACATTGCAGGGAGACTTTCTGACTGGATTGGTCGACGTTACACGATTGTCCTTGCTGGTTTAATTTTCTTCGTCGGAGCTGTACTTATGGGACTTTCTCCAAACTATGCATTTCTCATGTTTGGTCGTTTCTTTGCTGGTGTTGGCATAGGGTTTGCCTTCTTGATTGCTCCTGTTTATACCTCTGAAGTCTCCCCAACTTCATCTCGTGGCTTCCTCACTTCCTTGCCTGAGGTATTTCTGAATGGAGGGATTTTAGTTGGATACATTTCAAACTATGGATTTTCAAAGCTCCCACTCCGTTATGGTTGGCGAGTGATGCTTGGAATCGGTGCCATCCCGTCTATAATCCTAGCTATGGCCGTATTAGCCATGCCCGAGTCACCTAGATGGCTCGTTGCCAAGGGTCGATTAGGGGAAGCCAAAAAAGTTCTTTATAAAATATCTGATTCTAAAGAAGAGGCGCAGCTAAGACTAGCCGATATTAAAGAGATAACAGGGATCCCCTTGGACTGTGACGACGACTTTGTTTCAGTCACAAAAGTTCAAGGCAAAGGCGTATGGAAAGAACTATTTCTTCATCCTACACCTGCAGTTCGTCACATCTTCATTGCCTCCCTCGGGATTCACTTCTTCGCACAAGCCACTGGCATAGATGCTGTTGTTTTGTATAGTCCCAGAATCTTCGAGAAGGCTGGGATCAAATCCGACACAAATAAGCTTCTCGCAACTGTAGCTGTTGGATTTGTGAAAACAATGTTCGTCTTAGTTGCCACTTTTTTATTAGACCGCGTTGGGAGGCGCGTATTGTTGTTAACCAGTGTAGGTGGGTTAATAATCTCGCTTCTGACATTGGCGATTAGTCTCACTATTATTGATAATTCAAGTGCCACGCTGACATGGGCTATTTCACTTAGTATAGCAGCAGTGTTGTCCTATGCAGCTACTTTCTCAATAGGATCGGGTCCAATTACGTGGGTTTATAGTTCTGAGATATTTCCATTGAGGCTTCGAGCTCAAGGCGTGTCTATTGGTGCGGTGGTGAATAGGGTCACGAGCGGGGTCATCTCCATGACTTTCCTGTCCCTGTCCAACGCCATCACCATTGGTGGCGCTTTCTTTCTTTTTGCGGGCATTGCAATTGTCGCGTGGATCTTTCACTACACTATGCTCCCTGAAACACAGGGCAAAACATTGGAGGAAATAGAAGGGTCCTTCGGAAATTTCTGGAGGAAACCAAAAGCCAGTGCCACAGCTGAAGGCGCGAACGGAAAAATCCAATTAAGCACCAATGACAAGACTTATACAACTATGGATTAG 1563 0.4415 MAEGEATVLKSLEDFGPQKKLKRNKFACACAILASMTSILLGYDIGVMSGAAIYIKRDLKVTDVQIEILLGIINLYSPIGSYIAGRLSDWIGRRYTIVLAGLIFFVGAVLMGLSPNYAFLMFGRFFAGVGIGFAFLIAPVYTSEVSPTSSRGFLTSLPEVFLNGGILVGYISNYGFSKLPLRYGWRVMLGIGAIPSIILAMAVLAMPESPRWLVAKGRLGEAKKVLYKISDSKEEAQLRLADIKEITGIPLDCDDDFVSVTKVQGKGVWKELFLHPTPAVRHIFIASLGIHFFAQATGIDAVVLYSPRIFEKAGIKSDTNKLLATVAVGFVKTMFVLVATFLLDRVGRRVLLLTSVGGLIISLLTLAISLTIIDNSSATLTWAISLSIAAVLSYAATFSIGSGPITWVYSSEIFPLRLRAQGVSIGAVVNRVTSGVISMTFLSLSNAITIGGAFFLFAGIAIVAWIFHYTMLPETQGKTLEEIEGSFGNFWRKPKASATAEGANGKIQLSTNDKTYTTMD* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2171 520 Pfam Sugar (and other) transporter 30 485 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mtr4g2171 520 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 14 510 IPR045262 GO:0015144
Mtr4g2171 520 PRINTS Sugar transporter signature 38 48 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g2171 520 PRINTS Sugar transporter signature 121 140 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g2171 520 PRINTS Sugar transporter signature 294 304 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g2171 520 PRINTS Sugar transporter signature 388 409 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g2171 520 PRINTS Sugar transporter signature 411 423 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g2171 520 TIGRFAM SP: MFS transporter, sugar porter (SP) family 16 483 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mtr4g2171 520 ProSitePatterns Sugar transport proteins signature 2. 126 151 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr4g2171 520 PANTHER POLYOL/MONOSACCHARIDE TRANSPORTER 1 14 510 - -
Mtr4g2171 520 ProSitePatterns Sugar transport proteins signature 1. 84 101 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mtr4g2171 520 SUPERFAMILY MFS general substrate transporter 31 484 IPR036259 -
Mtr4g2171 520 CDD MFS_PLT 33 483 IPR044776 GO:0005351
Mtr4g2171 520 Gene3D MFS general substrate transporter like domains 20 489 IPR036259 -
Mtr4g2171 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 30 476 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2171 Mtr-Chr4 35295148 35297530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2171 13 514 Organic Solute Cotransporters AT3G18830 66.994 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2171 - - gmx:100816478 807.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2171 4 35295148 35297530 Mtr4g2171 4 35295148 35297530 ECH