Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2168 ATGGCATCTGCATCAGCATCTCTCTTCAAGTCATCAATTGTTCTTGACAAGTCTGAATGGGTGAAGGGCCAAACCCTCCGTCAATCTTCGGTGGCCGCTGTACGATGCAACCCCGCCGCTCCATCAAGTCTCACTATCAGAGCTGGTTCCTATGCCAATGAGCTCGTTAAGACCGCGAAAACAATTGCTTCACCAGGACGTGGTATTTTGGCCATGGATGAGTCCAATGCTACTTGTGGGAAAAGTTTGGCTTCAATTGGGCTAGAGAACACCGAAGTTAACCGCCCAGCATGGCGTACTCTTCTGGTGACAGTTCCATCTCTTGGAGAGTACATCTCTGGTGCCATTCTCTTTGAGGAGACTCTCTACCAATCCACAACAGATGGAAGGAAGATTGTGGATGTACTTATTGAGTAAAACATTGTTCCTGATATTAAAGTTGACAAGGGTTTGGTGCCCCTTGCTGGTTCCAATGATGAATGGTGCCAAGGTCTAGACGGTCTTGCCTCTCGTTCAGCTGCATACTACCAGCAAGATGCTCATTTCGCCAAATGGCGTACTGTTTTGAGCATCCCCAATGGTCCCTCTGCTCTTGCAGTCAAGGAAGCAGCCTGGGGTCTGGCTCGCTACGCTGCAATTAGTCAGGACAACGGATTGGTCCCAATTGTGGAACCAGAGATCTTGCTTGATGGAGAACATAGTATTGACAGAACTTTTGAAGTAGCACAAAAGGTTTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCAATTTGAGGGCATTCTCCTCAAGCCTAGCATGGTTACCCCAGGAGCTGAGTCCAAGGACAAGGTCTCTTCTGCAACAGTTGCTGACTATATCCTCAAGCTCCTTCACAGGAGAATCCCCCCAGCCGTCCCTGGTATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACGCTCAACTTGAATGCCATGAACCAATCTCCAAACCCATGGCACGTGTCATTCTCATATGCAAGAGCTCTCCAGAACACCGCATTGAAGACATGGGGAGGCCGCATAGAGAACGTTCAGGCAGCACAAGAAGCACTCCTTTTCCGTGCTAAGTCCAACTCACTTGCTCAACTTGGAAAGTACACTGGTGAGGGTGAATCTGAGGAAGCCAAGAAGGAATTGTTTGTCAAAGGATACTCTTATTAA 1194 0.4807 MASASASLFKSSIVLDKSEWVKGQTLRQSSVAAVRCNPAAPSSLTIRAGSYANELVKTAKTIASPGRGILAMDESNATCGKSLASIGLENTEVNRPAWRTLLVTVPSLGEYISGAILFEETLYQSTTDGRKIVDVLIE*NIVPDIKVDKGLVPLAGSNDEWCQGLDGLASRSAAYYQQDAHFAKWRTVLSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHSIDRTFEVAQKVWAEVFFYLAENNVQFEGILLKPSMVTPGAESKDKVSSATVADYILKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRIENVQAAQEALLFRAKSNSLAQLGKYTGEGESEEAKKELFVKGYSY* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2168 396 Gene3D Aldolase class I 36 395 IPR013785 -
Mtr4g2168 396 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 34 396 IPR000741 GO:0004332|GO:0006096
Mtr4g2168 396 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 34 396 - -
Mtr4g2168 396 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 257 267 IPR029768 -
Mtr4g2168 396 Pfam Fructose-bisphosphate aldolase class-I 54 396 IPR000741 GO:0004332|GO:0006096
Mtr4g2168 396 CDD FBP_aldolase_I_a 52 376 - -
Mtr4g2168 396 SUPERFAMILY Aldolase 44 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2168 Mtr-Chr4 35239182 35247158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2168 51 396 Miscellaneous Gene Families AT3G52930 54.261 4.64e-124 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2168 K01623 - gmx:100818383 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2168 4 35239182 35247158 Mtr4g2168 4 35239182 35247158 ECH