Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2162 ATGGACGCTATCAGAAAACAAGCTTCGAAGCTTCGAGAACAAGTCGCTCGCCAACAACAGGCTGTTTTGAAGCAGTTTGGAGGTGGCGGTTATGGTGGTTCAGATAACATGGTTACCGATGAGAGAGAGCTTCACTTACATCAGAAACTTGAGAAACTTTACATATCAACACGTGCCGGGAAGCATTATCAAAGGGACGTTGTTCGTGGAGTAGAAGGTTATATTGTTACAGGATCCAAGCAAGTTGAAATAGGAACAAAGTTGTCGGAAGATAGTAGGAAATATGGTGCAGAAAATACGTGTACCAGTGGGGGTACATTGTGCAGGGCCGCACTAAGTTATTCACGAGCCCGTGCCCAAATGGAGAAGGAGCGTGGAAACTTACTAAAAGCTCTTGGTACACAGGTTGCAGAACCCTTAAGGGCAATGGTGGTGGGAGCTCCATTAGAGGATGCTCGGCATCTTGCTCAACGTTATGATAGAATGCGACAGGATGCTGAAGCCCAGGCTATTGAAGTTTCTAAACGCCAGGCAAAAGTAAGAGAATTGCCAGGCAATTCTGAGATTGCTATGAAATTAGAAGCAGCAGAAGCAAAACTGCAAGACCTGAAGTCAAACATGAACATATTGGGGAGGGAAGCAGCTGCAGCATTGGCTGCTGTTGAAGCACAGCAGCAGAGGTTAACCCTTCAACGTCTTATAGCAATGGTTGAAGCAGAGCGTTCCTATCACCAAGTAGTCCTACAAATTCTTGATCAGCTTGAGGGGGAGATGATATCAGAAAGACAACGTATTGAAGCCCCTCCTACTCCCAGTATGGATAACAGCATGCCACCACCCCCACCATATGAAGAAGTGAATGGTGTTTATGCTTCACAGACGACACATAACGGATCAACAGACAGCATGGGTTACTTCTTAGGAGAGGTTTTATTCCCATACTCTGCTGTGTCTGAAGTGGAGCTGAATCTATCAGTTGGTGATTATATTGTCATTCGAAAGGTGACAAACAACGGATGGGCCGAGGGAGAGTGCAAAGGGAGAGCAGGATGGTTTCCGTTTAGTTACATTGAAAGAAGGGAACGTGTTCTTGCGAGCAAAGTAGCTGAAGTGTTTTAA 1119 0.4558 MDAIRKQASKLREQVARQQQAVLKQFGGGGYGGSDNMVTDERELHLHQKLEKLYISTRAGKHYQRDVVRGVEGYIVTGSKQVEIGTKLSEDSRKYGAENTCTSGGTLCRAALSYSRARAQMEKERGNLLKALGTQVAEPLRAMVVGAPLEDARHLAQRYDRMRQDAEAQAIEVSKRQAKVRELPGNSEIAMKLEAAEAKLQDLKSNMNILGREAAAALAAVEAQQQRLTLQRLIAMVEAERSYHQVVLQILDQLEGEMISERQRIEAPPTPSMDNSMPPPPPYEEVNGVYASQTTHNGSTDSMGYFLGEVLFPYSAVSEVELNLSVGDYIVIRKVTNNGWAEGECKGRAGWFPFSYIERRERVLASKVAEVF* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2162 372 PANTHER PROTEIN, PUTATIVE-RELATED 1 372 - -
Mtr4g2162 372 PANTHER SH3 DOMAIN-CONTAINING 1 372 - -
Mtr4g2162 372 Coils Coil 1 21 - -
Mtr4g2162 372 Pfam Variant SH3 domain 310 358 IPR001452 GO:0005515
Mtr4g2162 372 Gene3D Arfaptin homology (AH) domain/BAR domain 45 267 IPR027267 -
Mtr4g2162 372 Coils Coil 186 213 - -
Mtr4g2162 372 SUPERFAMILY BAR/IMD domain-like 45 258 IPR027267 -
Mtr4g2162 372 SUPERFAMILY SH3-domain 267 360 IPR036028 GO:0005515
Mtr4g2162 372 Coils Coil 220 240 - -
Mtr4g2162 372 ProSiteProfiles Src homology 3 (SH3) domain profile. 303 362 IPR001452 GO:0005515
Mtr4g2162 372 Gene3D SH3 Domains 302 362 - -
Mtr4g2162 372 Coils Coil 149 169 - -
Mtr4g2162 372 SMART SH3_2 306 361 IPR001452 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2162 Mtr-Chr4 35174703 35178473 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2162 - - gmx:100777051 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2162 4 35174703 35178473 Mtr4g2162 4 35174703 35178473 ECH