Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2159 ATGGCACAAAAACTTTCACTACACTTCAATCACACTCTTCACACATCACTACACTTGAATCGCCACTTACATCTTCATCTCCTCCCACCTTCCCTTCTAAGGAAGAACACTACTATCCATCCAACAAGCCAGTGCATTATTACATCCTCGAGCCAGAACCGTCGCTTCGAGTTTCTAACAGCTTGCTCAGTTCAAAATTATGATGTCGCAGATGAGTCTGAAGAAAAAGATCAAATCAGCGAGGTTTCTTCTAAGGAACAAGCACAAGAAGAAGAAGTGAAGGAACTGGTTGAGCAGAGTATATGGATTCAGATGAAGGAAATTGTTTTATTTACTGGACCTGCAATTGGTCTTTGGTTATGCGGACCGTTGATGAGTCTCATTGATACTGCTGTTGTTGGTCAAGGAAGTTCGATTGAACTTGCTGCTTTAGGTCCTGCTACTGTTTTTTGTGATTATTTGGGCTACTCTTTTATGTTTCTGTCGATTGCTACTTCGAATATGGTTGCTACTGCCCTTGCTAAACAGGATAGGGAGGAAGTGCAGCATCACATATCTGTCTTGCTTTTTATCGGGTTAGCATGTGGCTCGGCGATGCTTTTTTTCACAAGGTTATTAGGCGCAGCAACGCTAGCAGCTTTTACTGGACCGAAGAATGTACATTTAGTACCTGCAGCTAATACTTATGTCCAGATTCGAGGGTTGGCATGGCCTTGTTTACTTATTGGATCGATTGCTCAAAGTGCAAGTCTTGGTATGAAAGATTCTTGGGGACCCTTGAAGGCTTTGGCTGCTGCCAGTATTATAAATGGAATTGGTGATATAATTCTGTGCAGATATTTAAACTATGGGATTGCTGGGGCTGCATGGGCTACATTGGCATCCCAAGTCGTTGCTGCGTATATGATGAGCAAAGCTCTAAATGAGAAGGGATACAATGCATTTTCCTTCACCATTCCTTCAGGGAAGGAATTTCTGTCAATATTTAGTCTTGCTGCTCCTGTATTTGTGACATTGATGTTAAAGGTGGCTTTCTACTCTCTAATTATATATTTTGCTACATCAATGGGTACAAATAAAATAGCTGCTCATCAAGTCATGCTTCAGATCTACATGTTATGCGCAATATGTGGTGAACCTCTCTCCCAAACCGCTCAATCATTTATGCCTGAGTTGATGTATGGAGTAAATCGGAGTTTGGCAAAGGCTCGGTCGCTTCTAAGGTCTCTTCTAACTATTGGAGCTGTATTCGGGTTGCTTTTGGGGATTGTTGTAACATATGTTACTTGGTTATTCCCCTACATTTTTACACCTGATCAGATGGTCATCCAGGAGATGCATAGGATTCTGATACCATACTTTTTAGCACTACTGGTCACACCTGCAACAGTTGGCCTGGAGGGAACATTGCTGGCTGGGCGGGATCTAAGATTTATAAGTTTGTCAATGACTGGATGCTTTTGTTTGAATGGTCTAGTATTATTGATCCTATCTAGCAGATATGGTTTGCTAGGCTGTTGGTTTTCCCTTGCTGGATTTCAATGGGTTCGGTTTTCATCGGCCCTTCTGCGCCTTCTATCTCCCAATGGCATTTTATACTCGGAAGATAAAAGCCAGTCTGAGCTGCAAAAATTGAAGACTGCATAG 1647 0.4208 MAQKLSLHFNHTLHTSLHLNRHLHLHLLPPSLLRKNTTIHPTSQCIITSSSQNRRFEFLTACSVQNYDVADESEEKDQISEVSSKEQAQEEEVKELVEQSIWIQMKEIVLFTGPAIGLWLCGPLMSLIDTAVVGQGSSIELAALGPATVFCDYLGYSFMFLSIATSNMVATALAKQDREEVQHHISVLLFIGLACGSAMLFFTRLLGAATLAAFTGPKNVHLVPAANTYVQIRGLAWPCLLIGSIAQSASLGMKDSWGPLKALAAASIINGIGDIILCRYLNYGIAGAAWATLASQVVAAYMMSKALNEKGYNAFSFTIPSGKEFLSIFSLAAPVFVTLMLKVAFYSLIIYFATSMGTNKIAAHQVMLQIYMLCAICGEPLSQTAQSFMPELMYGVNRSLAKARSLLRSLLTIGAVFGLLLGIVVTYVTWLFPYIFTPDQMVIQEMHRILIPYFLALLVTPATVGLEGTLLAGRDLRFISLSMTGCFCLNGLVLLILSSRYGLLGCWFSLAGFQWVRFSSALLRLLSPNGILYSEDKSQSELQKLKTA* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2159 548 Coils Coil 79 99 - -
Mtr4g2159 548 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 48 537 IPR044644 -
Mtr4g2159 548 Pfam MatE 120 272 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr4g2159 548 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 48 537 - -
Mtr4g2159 548 CDD MATE_DinF_like 104 527 IPR044644 -
Mtr4g2159 548 TIGRFAM matE: MATE efflux family protein 114 507 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2159 Mtr-Chr4 35118956 35125126 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2159 K03327 - gmx:100778835 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2159 4 35118956 35125126 Mtr4g2159 4 35118956 35125126 ECH