Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2157 ATGACACTCAAACTTCAACTACACTTTCATCACATTTCTCCCTTCAAAATCCTCAACCTCACCCCACCTTCTCACTCACCTCTCCTTTTCCACGCACCTAACGACACTTTTACTATTTCGTCTAAGTTATTCCATGTGGCGTCAAAACGACGTAGCGTTAGGATTTTAAACGCTCGCGTGGTTGGAAGTAATGAACTAACTGATGAGTCCGACGACGAAGAATGTTATGAGGAAATGGGAGAGAAAAAAGAACTAGCAGAGAAGAGTGTGTGGAATCAAATGAAGGAAATTGTGAAGTTTACAGGACCAGCTATGGGATTATGGTTATGTGATCCACTCATGAGCCTCATAGATACTGCTGTTGTTGGTCAGGGAAGTTCAACCGAGCTTGCTGCTTTAGGTCCTGCCACGGTTGTTTGTGATTACATGACCTTAACGTTCATGTTTCTGTCAGTTGTTACATCCAATATAATTGCTACTGCCCTTGCTAAACAGGATAGAGAGGATGTGCAGCATCACTTGTCTATCCTGCTTTTTATTGGGTTGGCATGTGGCTTGATGATGCTTTTGTCTACAAAGTTATTCGGTGCAGCAACACTTGCCGCTTTCACTGGGCCAAAGAATGCACATGTAGTACCTGCAGCTAATACTTATGTGCAGATTCGAGCCTTGTCGTGGCCTGCTTTACTCGTTGGATGGGTTGCTCAGAGTGCAAGCCTTGGTATGAAAGATTCATGGGGACCCTTAAAGGCTTTGGCTGCTGCCAGTGTTATAAATGGAATTGGTGATATACTTTTATGCAGCTGTTTAGGCTATGGTATAGCGGGGGCAGCATGGGCTACAATGGTGTCACAAGTTGTAACCGCGTATATGATGATTCAGACCCTAAACAAGAGGGGATATAATGCATTTGCCTTCTCCATTCCTTCAATGAAGGAATTTCTGACAATACTTAGCCTTGCTGCTCCAGTATATTTGACGTCGATATCAAAGGTGGCTTTCTTTTCTCTACTTATATATGTTGCTACATCAATGGGTACACAAACAATGGCCGCTCATCAAGTCATGATTCAAATCTACATGGCGTGTACAGTTTGGGGAGAACCTCTTTGCCAAACAGCGCAATCATTTATGCCGGAGTTAATGTATGGAGTAAATCGGAGTTTGCCAAAGGCTCGATTGCTACTAAGGTCTCTTGTAATAATTGGAGCTATACTTGGATTGTTGTTAGGGATAGTTGGAACATCTCTTATTTGGTTATTCCCATACATATTTACATCTGATCAGATGGTTATCCAGAAGATGCATAGGACACTGATTCCGTTCTTTGTTGCACTAGCTGTGACAGCCCCTACTCGCAGCCTGGAGGGAACATTGCTGGCAGGACAGGATCTAAGATTTTTTAGCTTATCAACGTGTGGATGCTTTTGTGTGTCTGCTCTAGTATTATTGATCTTTAGTAGATATGGTTTGCAAGGATGCTGGTTTACCCTCGCTGGATTTCAGTGGGCTCGGTTTTCAGTAGCCCTTCTACGCCTTATCTTTCCTAATGGAATTTTATACTCGAAGCGGCCAGTATAA 1581 0.4301 MTLKLQLHFHHISPFKILNLTPPSHSPLLFHAPNDTFTISSKLFHVASKRRSVRILNARVVGSNELTDESDDEECYEEMGEKKELAEKSVWNQMKEIVKFTGPAMGLWLCDPLMSLIDTAVVGQGSSTELAALGPATVVCDYMTLTFMFLSVVTSNIIATALAKQDREDVQHHLSILLFIGLACGLMMLLSTKLFGAATLAAFTGPKNAHVVPAANTYVQIRALSWPALLVGWVAQSASLGMKDSWGPLKALAAASVINGIGDILLCSCLGYGIAGAAWATMVSQVVTAYMMIQTLNKRGYNAFAFSIPSMKEFLTILSLAAPVYLTSISKVAFFSLLIYVATSMGTQTMAAHQVMIQIYMACTVWGEPLCQTAQSFMPELMYGVNRSLPKARLLLRSLVIIGAILGLLLGIVGTSLIWLFPYIFTSDQMVIQKMHRTLIPFFVALAVTAPTRSLEGTLLAGQDLRFFSLSTCGCFCVSALVLLIFSRYGLQGCWFTLAGFQWARFSVALLRLIFPNGILYSKRPV* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2157 526 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 62 522 - -
Mtr4g2157 526 Pfam MatE 109 261 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr4g2157 526 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 62 522 IPR044644 -
Mtr4g2157 526 TIGRFAM matE: MATE efflux family protein 103 495 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mtr4g2157 526 CDD MATE_DinF_like 93 513 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2157 Mtr-Chr4 35082832 35088062 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2157 K03327 - mtr:MTR_4g071390 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2157 4 35082832 35088062 Mtr4g2157 4 35082832 35088062 ECH