Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2154 ATGGCTTTAAACGCAGAAGCTCCAGAGTTTTTTCCTAACTACAAACTACAAAATCCTCAATCTCACTGCTACCTTTTCTCTACTCTCCCTCATCGTCTACATCCTTATTTCTATTACTACCCTAGTGCTTATAAACATCCATTTCCTTTCCACTTTCATCCACTTCCAAACCACCTACCCACTTTTCCTAGGTTTGAATCCGAAGCTAAACTACCGACCCATTTTCATGGCAGTTTTGAAAACCATGAACAAGTGCTGAAAAATGACATGGTGGTGGAGCCATTTATCGAGGGTGATGATTCAAACAATGTTTTTCATGAGGTTGTAAGTGGTGGTGAAATGGAACACCGTCGTTCTCATGGGGTCAGATCCGGAGGTCGTCTTGAGTGGAGGAGGAAGAGAGGACGCAAGGATGTTGAACAAAAAGAGAAGAAAGTTAATGAGAAACCTTTGCTGAGAAACAACCGCTACGGCCATGCAAAAAATATTCGTTATCATTGTCACAAGAAGAATAGTGGAGGTGGTTTTCCATTGGTTCCGGTTCAGAAGGATGGTAAAGAAACAACGGTTATGATTAAGAACATTCCTAGCAAATATACTCGAGATAAGTTGTTGGATTTCTTGGAGGAGTTTTGCATGCGTGAAAATGCCAAAGATCAAGCCAATGGTGAAGAAAGTACTTTTGCTTTTAATGCCGTATACTTGCCTATTGATTTCTGTACTGAGTTAAACAAAGGCTATGCCTTTGTTAATTTCACCAAGCATGAGGCAGCTTGGAAATTTCAACTGACAGCCTCTGGGAAGAACTGGGAACACTTCAATTCCAGTAAGATATGTGATGTGGTTGCTGCACGCCTCCAGGGAAAAGAGAAGCTAGAGAATCATTTTGGAAGCATGGTTTTTCCCTATTCGTCCGAGGAAGTTCTGCCACTGTTCTTCAGTCCACCTCGGGATGGTGTGACCAAAGGAAACCAGAGGACAATGGGAAAGCTTCTTAAGCCTTATTATTAG 1011 0.4184 MALNAEAPEFFPNYKLQNPQSHCYLFSTLPHRLHPYFYYYPSAYKHPFPFHFHPLPNHLPTFPRFESEAKLPTHFHGSFENHEQVLKNDMVVEPFIEGDDSNNVFHEVVSGGEMEHRRSHGVRSGGRLEWRRKRGRKDVEQKEKKVNEKPLLRNNRYGHAKNIRYHCHKKNSGGGFPLVPVQKDGKETTVMIKNIPSKYTRDKLLDFLEEFCMRENAKDQANGEESTFAFNAVYLPIDFCTELNKGYAFVNFTKHEAAWKFQLTASGKNWEHFNSSKICDVVAARLQGKEKLENHFGSMVFPYSSEEVLPLFFSPPRDGVTKGNQRTMGKLLKPYY* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2154 336 PANTHER RNA BINDING PROTEIN 9 325 - -
Mtr4g2154 336 Gene3D - 129 274 IPR012677 -
Mtr4g2154 336 PANTHER MEI2 C-TERMINAL RRM ONLY LIKE 1 9 325 - -
Mtr4g2154 336 Pfam RNA recognition motif 2 188 296 IPR007201 -
Mtr4g2154 336 SUPERFAMILY RNA-binding domain, RBD 182 270 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2154 Mtr-Chr4 35046169 35048095 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2154 - - mtr:MTR_4g071310 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2154 4 35046169 35048095 Mtr4g2154 4 35046169 35048095 ECH