Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2150 ATGGCTTCGTCTTCACGAGCACCGAGCAACTCACCGTTCTCTCACCGGAAACCTTCCACTCCTTACTCTTCCGCTTCTTCCTTCACCGCCGGAAAGTTAATGCCGCGTTCCTGCTCTACTTCGGCGTCTTCGTTTTTCAACTCCGGTGGTGGCGCTGACCGATCCATGTTGACTCCGAGTCGTAGTCAAAGCGAGTCAAACTATTTCGATGTGCACAGTTATGGTTCTCCGGTGGAGGAGGTGGATTCTTCCACTCCGAGGGATAGTATTTCGGTGACGATTCGGTTTAGACCGTTGAGTGAAAGAGAGTATCATAGAGGAGACGAAATTGCGTGGTATGCTGATGGTGATAAGATTGTGAGGAATGAGTTTAATCCAGCTACTGCTTATGCTTTTGATAAAGTATTTGGACCGCATACAAATTCGGATGAGGTGTATGAAGTAGCAGCAAAACCTGTCGTGAAGGCAGCCATGGAAGGGGTTAATGGAACAGTGTTTGCCTATGGTGTAACGAGTAGTGGAAAGACACATACGATGCATGGAGATCAAAACTCTCCTGGTATCATACCACTAGCTATAAAAGATGTTTTCAGCAGTATCCAAGATACTCCAGGAAGAGAGTTCTTACTTCGAGTGTCATATCTAGAAATATACAATGAGGTGATAAATGACTTGCTTGACCCAACTGGCCAAAATTTGCGTGTTAGAGAAGATGCGCAGGGTACTTATGTGGAGGGTATAAAGGAAGAAGTTGTTTTGTCTCCTGGACATGCTCTCTCCTTTATTGCTGCTGGAGAAGAGCATCGTCATGTCGGATCAAACAATTTTAACCTCTTCAGCAGTCGAAGCCACACAATTTTTACACTTATGATTGAAAGCAGCGCACATGGTGAAGAATATGATGGAGTTATATTCTCTCAGCTTAATTTGATTGATCTGGCTGGATCTGAAAGCTCGAAAACCGAAACAACTGGATTAAGAAGAAAAGAAGGATCATATATAAACAAAAGTCTTTTGACACTTGGAACTGTCATTGGAAAACTGAGTGAGGGGAAATCATCTCATGTTCCGTATCGAGATTCAAAGCTTACCCGCCTCCTGCAATCTTCACTTAGTGGTCATGGTCATGTTTCACTTATATGCACTGTGACTCCAGCATCCAGTAATATGGAAGAAACTCACAATACCTTGAAGTTTGCAAGCAGGGCAAAGCGAGTAGAAATATATGCTTCACGTAACAAGATTATTGATGAAAAATCTCTTATTAAGAAATACCAGAGAGAAATTTCAGTTCTCAAACTTGAACTTGATCAGCTGAAGAAGGGGATGCAATTTGGTGTGAACCATGAGGAAATTTTGACCTTAAAGCAAAAGTTAGAGGAAGGTCAAGTTAAAATGCAGTCAAGATTGGAAGAAGAGGAAGAAGAGAAGGTTGCTCTTGCGAGTAGGATCCAGAAGCTAACCAAGCTCATTCTGGTTTCATCAAAGAATGCAAATCCTGGATATCTAGCTGATGCTCCTGGCCACCAGCAAAGTCTCTCTACTGGCGAGGATGATTATGATGCCCTACAAGATGGCTCTCTTTTGTTTGAAAGTGAGAGCCAAAAAGATGTTTCCACAGTGGCTTCTGATCTGTCTCATGATGTTAGACATAGAAGAACGTCAAGTAAACGGAACGAAGAGCTCTCCACATCTAACAGTATTATAACTGAATCAACACAAGCTGGTGAACTGATCAGCAGAACAAGGATACCAGCAGGTGGGGTGACGATGTCTGATCAGATGGATCTCCTTGTTGAGCAAGTCAAAATGCTTGCTGGAGACATTGCGTTCAGTACTAGCACTCTAAAGCGCCTGACGGAGCAGTCTGTAAATGATCCTGAAAGTTCCAGAACTCAGATCGAGAACTTGGAACAAGAAATCCAAGAAAAAAGGAATCAATTGAGGGGTTTAGAACAAAGAATAATTGAGAGTGGTCAAACATCAGTAGCTAATCCTTCCCTAGTTGAAATGCAGCAGACGGTCACAAGGTTGATGACTCAGTGTAATGAAAAGGCATTTGAGCTGGAGATAAAATCTGCGGACAACCGTGTCCTTCAAGAACAATTAAATAGCAAGTGCTCTGAAAACAGAGAATTGCAAGAAAAGGTAAAGTTGCTAGAGCAGCAACTAGCAACCGATACTGGTGGAACCTCGCTACTGCTGGCTGATGAGTGTGCGTCTGGAGAGCACATTGATGAGTTGAAAAGGAAAATACAGTCCCAGGAGATTGAAAATGAAAAACTGAAACTAGAACAAGTACAATTGTCTGAAGAGAATAGTGGATTGCATGTACAGAATCAGAAACTTTCTGAAGAAGCTTCTTATGCCAAAGAACTGGCCTCTGCTGCTGCTGTGGAATTGAAAAACTTGGCTGGGGAGGTGACAAAACTTTCATTGCAGAATGCAAAGTTGGAAAAAGAACTAATGGCTGCTCGAAACCTGGCCAATACTCGAAGTGCTGTCACACATACAGTTAATGGTGTTCACCGCAAGTACAATGATCCAAGATCTGGAAGGAAGGCTAGAGTTTCTAGCCGTGCAAATGAAAATGTGGGACCTGGTAGAGATGAGTTGGAGTCATGGAGTCTTGAAGTTGATGATCTGAAGATGGAACTTCAGGCTAGAAAGCAACGAGAGGCAGCTCTTGAGGCTGCATTGGCCGAAAAGGAAATTATGGAAGAGGAGCACAGGAACAGGGTTGAAGAGGCCAAGAAAAGAGAATCCTCGTTGGAGAACGATTTAGCAAATATGTGGGTCCTCGTTGCAAAGTTAAAGAAAGAAGTAGGTGTTGTCGCAGAATCAAACATTGACAAAATATCTGGTGATGGGGAAGCACATACAAATGATCCGAAAACTAATGACAGTGAAAGTAATATTATCTCTAAGGAGCAAACTTTGGATGTATCAGAACCAAACAACGAAACTCCCAAGGAAGAACCTTTGGTTGTTCGTCTCAAGGCAAGAATGCAAGACATGAAGGAAAAAGAACTCAAGCATCTTGGTAATGGAGACGCCAATTCACATGTTTGTAAAGTGTGCTTTGAATCTTCAACTGCAGCAATTCTTCTTCCATGCCGTCATTTTTGTTTGTGTAAATCTTGTTCACTGGCGTGCTCTGAATGTCCAATATGCCGAACAAATATAGCAGATAGGCTTTTTGCTTTTACATCTTGA 3216 0.4248 MASSSRAPSNSPFSHRKPSTPYSSASSFTAGKLMPRSCSTSASSFFNSGGGADRSMLTPSRSQSESNYFDVHSYGSPVEEVDSSTPRDSISVTIRFRPLSEREYHRGDEIAWYADGDKIVRNEFNPATAYAFDKVFGPHTNSDEVYEVAAKPVVKAAMEGVNGTVFAYGVTSSGKTHTMHGDQNSPGIIPLAIKDVFSSIQDTPGREFLLRVSYLEIYNEVINDLLDPTGQNLRVREDAQGTYVEGIKEEVVLSPGHALSFIAAGEEHRHVGSNNFNLFSSRSHTIFTLMIESSAHGEEYDGVIFSQLNLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVIGKLSEGKSSHVPYRDSKLTRLLQSSLSGHGHVSLICTVTPASSNMEETHNTLKFASRAKRVEIYASRNKIIDEKSLIKKYQREISVLKLELDQLKKGMQFGVNHEEILTLKQKLEEGQVKMQSRLEEEEEEKVALASRIQKLTKLILVSSKNANPGYLADAPGHQQSLSTGEDDYDALQDGSLLFESESQKDVSTVASDLSHDVRHRRTSSKRNEELSTSNSIITESTQAGELISRTRIPAGGVTMSDQMDLLVEQVKMLAGDIAFSTSTLKRLTEQSVNDPESSRTQIENLEQEIQEKRNQLRGLEQRIIESGQTSVANPSLVEMQQTVTRLMTQCNEKAFELEIKSADNRVLQEQLNSKCSENRELQEKVKLLEQQLATDTGGTSLLLADECASGEHIDELKRKIQSQEIENEKLKLEQVQLSEENSGLHVQNQKLSEEASYAKELASAAAVELKNLAGEVTKLSLQNAKLEKELMAARNLANTRSAVTHTVNGVHRKYNDPRSGRKARVSSRANENVGPGRDELESWSLEVDDLKMELQARKQREAALEAALAEKEIMEEEHRNRVEEAKKRESSLENDLANMWVLVAKLKKEVGVVAESNIDKISGDGEAHTNDPKTNDSESNIISKEQTLDVSEPNNETPKEEPLVVRLKARMQDMKEKELKHLGNGDANSHVCKVCFESSTAAILLPCRHFCLCKSCSLACSECPICRTNIADRLFAFTS* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2150 1071 Coils Coil 696 723 - -
Mtr4g2150 1071 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 998 1068 IPR013083 -
Mtr4g2150 1071 MobiDBLite consensus disorder prediction 966 985 - -
Mtr4g2150 1071 ProSiteProfiles Kinesin motor domain profile. 89 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g2150 1071 SUPERFAMILY RING/U-box 1023 1063 - -
Mtr4g2150 1071 MobiDBLite consensus disorder prediction 843 869 - -
Mtr4g2150 1071 MobiDBLite consensus disorder prediction 1 87 - -
Mtr4g2150 1071 Coils Coil 872 927 - -
Mtr4g2150 1071 PANTHER CENTROMERE PROTEIN E 79 1032 - -
Mtr4g2150 1071 Coils Coil 456 490 - -
Mtr4g2150 1071 MobiDBLite consensus disorder prediction 843 857 - -
Mtr4g2150 1071 ProSiteProfiles Zinc finger RING-type profile. 1024 1059 IPR001841 -
Mtr4g2150 1071 SMART kinesin_4 87 414 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g2150 1071 Pfam Kinesin motor domain 95 406 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g2150 1071 PRINTS Kinesin heavy chain signature 160 181 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g2150 1071 PRINTS Kinesin heavy chain signature 274 291 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g2150 1071 PRINTS Kinesin heavy chain signature 307 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g2150 1071 PRINTS Kinesin heavy chain signature 356 377 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Mtr4g2150 1071 MobiDBLite consensus disorder prediction 543 559 - -
Mtr4g2150 1071 Coils Coil 801 828 - -
Mtr4g2150 1071 MobiDBLite consensus disorder prediction 1 71 - -
Mtr4g2150 1071 Gene3D Kinesin motor domain 80 436 IPR036961 -
Mtr4g2150 1071 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 444 IPR027417 -
Mtr4g2150 1071 Coils Coil 745 772 - -
Mtr4g2150 1071 ProSitePatterns Kinesin motor domain signature. 306 317 IPR019821 GO:0003777|GO:0005524|GO:0007018
Mtr4g2150 1071 Coils Coil 422 442 - -
Mtr4g2150 1071 MobiDBLite consensus disorder prediction 953 993 - -
Mtr4g2150 1071 Coils Coil 627 661 - -
Mtr4g2150 1071 MobiDBLite consensus disorder prediction 539 569 - -
Mtr4g2150 1071 PANTHER KINESIN-LIKE PROTEIN KIN-7D, MITOCHONDRIAL 79 1032 - -
Mtr4g2150 1071 Pfam Zinc finger, C3HC4 type (RING finger) 1022 1063 - -
Mtr4g2150 1071 CDD KISc_CENP_E 89 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2150 Mtr-Chr4 34981696 34993384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2150 32 1071 Miscellaneous Gene Families AT4G39050 71.226 0.0 1447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2150 K11498 - gmx:100800460 1682.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2150 4 34981696 34993384 Mtr4g2150 4 34981696 34993384 ECH