Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2133 ATGAAAAGCATCACATGTTATTTGCTACTATTGTGCATGTTATTTACAACGTGTTATTCATTAAATAATGATCTTGATGCGTTGCTAAAGCTAAAAAAATCAATGAAAGGAGAGAAAGCCAAAGATGATGCACTCAAAGACTGGAAATTTTCAACTTCTGCTTCAGGTCACTGTTCATTTTCCGGTGTCAAATGCGACGGAGAACAACGAGTGATTGCTCTAAACGTGACGCAAGTTCCACTCTTCGGACACCTTTCCAAGGAGATCGGAGAGTTGAACATGCTCGAGAGCCTTACAATCACTATGGACAATCTCACCGGCGAGCTTCCAACTGAGCTATCCAAACTTACTTCTCTTAGAATCCTCAACATCTCTCACAACCTCTTCTCCGGTAACTTCCCCGGCAACATCACTTTCGGAATGAAGAAACTTGAGGCTCTAGATGCTTATGACAATAATTTCGAAGGTCCTCTTCCAGAGGAAATCGTTAGCCTGATGAAACTCAAGTACTTAAGTTTTGCTGGAAACTTTTTCTCCGGTACAATACCGGAGAGTTACTCGGAGTTTCAGAAGTTGGAGATTTTAAGGCTCAACTATAACAGTTTAACGGGGAAGATTCCGAAGAGTTTGTCTAAGTTAAAGAAGCTGAAGGAACTCTGTTTAGGTTACGATAATGCTTACGCCGGTGGAATTCCACCGGAGTTCGGTTCAATCAAATCTCTCCGATATCTGGACATTTCTAACTCTAACCTCACCGGAGAAATTCCACCGAGTCTTGGAAATTTAGAAAACCTCGACTACTTGTTTTTGCAAATGAACTACCTCACCGGAAAAATTCCACCCGAACTCTCTTCAATGCGAAGTCTCATGATGTTGGATCTCTCCATCAACGAACTCTCAGGGGAGATTCCAGAAACCTTCTCAAAGCTGAAACATCTCACTCTTATCAATTTCTTCCAGAACAAGCTTTGCGGTTCAATTCCAGCGTTCGTCGGTGATCTTCCTAACCTCGAAACGCTTCAGGTTTGGGACAACAATTTCTCTTCTGTATTGCCGCAGAATCTCGGTTCAAACGGAAAGTTCATATACTTTGACGTTACGAAGAATCACCTCACCGGATTGATCCCACCGGAGTTATGCAAATCGAAGAAGTTGAAAACGTTTATCGTTTCTGACAACTTTCTCAGCGGTCCAATACCTAACGGAATCGGTGCGTGTAAGTCACTTGAAAAAATCAGAGTCGCTAATAACTACTTGGACGGCCTGGTCCCACCGGGAATTTTTCAGTTGCCTTCTGTAACGATGATGGAGCTTAGAAATAACCGTTTTAACGGCCAACTACCATCGGAGATTTCCGGCAATTCTCTCGGGATTCTCGCTCTTTCTAACAATTTATTTACCGGGAGGATTTCGGCGTCCATGAAGAATCTCCGATCACTGCAGACTCTGTTACTCGACGCCAATCAGTTTGTCGGAGAAATTCCGACAGAGGTCTTTGCTTTACCGGTGTTGACTAGAATTAACATAAGTGGCAACAATCTCACTGGTGGAATTCCAAAGACGGTTACTCAATGTAGTACATTGACAGCCGTTGACTTCAGCCTAAACATGCTTACCGGTGAGGTTCCTAAAGGGATGAAGAATCTGAAGGTGCTAAACATTTTGAATGTTTCGCATAATAGCATATCGGGGCAAATCCCCAATGATATTAGATTCATGATGAGTCTAACGACGCTGGATTTATCTTACAACAATTTCACCGGAATTGTCCCCACCGGTGGTCAGTTTTTGGTCTTCAACGACCGTTCATTTGCGGGAAACCCTAGCTTATGTTTCCCACACCAATCAACATGTTCTTCATTGCTCTATCCTTCGAGAAAAAGCCATGCAAAGGAGAAAGTCATCGTCATAGCAATTGTCTTTGCCACAGTGGTTTTGATGGTAATTGTAACATTGTACATGATAAGGAAGAGGAAGCGTCACATGGCAAAAGCATGGAAGCTAACAGCGTATTAG 2016 0.4271 MKSITCYLLLLCMLFTTCYSLNNDLDALLKLKKSMKGEKAKDDALKDWKFSTSASGHCSFSGVKCDGEQRVIALNVTQVPLFGHLSKEIGELNMLESLTITMDNLTGELPTELSKLTSLRILNISHNLFSGNFPGNITFGMKKLEALDAYDNNFEGPLPEEIVSLMKLKYLSFAGNFFSGTIPESYSEFQKLEILRLNYNSLTGKIPKSLSKLKKLKELCLGYDNAYAGGIPPEFGSIKSLRYLDISNSNLTGEIPPSLGNLENLDYLFLQMNYLTGKIPPELSSMRSLMMLDLSINELSGEIPETFSKLKHLTLINFFQNKLCGSIPAFVGDLPNLETLQVWDNNFSSVLPQNLGSNGKFIYFDVTKNHLTGLIPPELCKSKKLKTFIVSDNFLSGPIPNGIGACKSLEKIRVANNYLDGLVPPGIFQLPSVTMMELRNNRFNGQLPSEISGNSLGILALSNNLFTGRISASMKNLRSLQTLLLDANQFVGEIPTEVFALPVLTRINISGNNLTGGIPKTVTQCSTLTAVDFSLNMLTGEVPKGMKNLKVLNILNVSHNSISGQIPNDIRFMMSLTTLDLSYNNFTGIVPTGGQFLVFNDRSFAGNPSLCFPHQSTCSSLLYPSRKSHAKEKVIVIAIVFATVVLMVIVTLYMIRKRKRHMAKAWKLTAY* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2133 671 Pfam Leucine rich repeat N-terminal domain 22 66 IPR013210 -
Mtr4g2133 671 PANTHER UNNAMED PRODUCT 7 671 - -
Mtr4g2133 671 Gene3D Ribonuclease Inhibitor 23 139 IPR032675 -
Mtr4g2133 671 Gene3D Ribonuclease Inhibitor 333 621 IPR032675 -
Mtr4g2133 671 Gene3D Ribonuclease Inhibitor 226 330 IPR032675 -
Mtr4g2133 671 Gene3D Ribonuclease Inhibitor 140 225 IPR032675 -
Mtr4g2133 671 PANTHER RECEPTOR PROTEIN KINASE CLAVATA1 7 671 - -
Mtr4g2133 671 Pfam Leucine Rich repeat 574 588 IPR001611 GO:0005515
Mtr4g2133 671 SMART LRR_typ_2 262 286 IPR003591 -
Mtr4g2133 671 SMART LRR_typ_2 116 140 IPR003591 -
Mtr4g2133 671 SMART LRR_typ_2 573 596 IPR003591 -
Mtr4g2133 671 SMART LRR_typ_2 189 213 IPR003591 -
Mtr4g2133 671 SMART LRR_typ_2 334 358 IPR003591 -
Mtr4g2133 671 SMART LRR_typ_2 477 501 IPR003591 -
Mtr4g2133 671 SMART LRR_typ_2 430 454 IPR003591 -
Mtr4g2133 671 SUPERFAMILY RNI-like 251 593 - -
Mtr4g2133 671 SUPERFAMILY L domain-like 53 254 - -
Mtr4g2133 671 Pfam Leucine Rich Repeat 240 262 IPR001611 GO:0005515
Mtr4g2133 671 Pfam Leucine Rich Repeat 191 213 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2133 Mtr-Chr4 34858279 34860730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2133 18 671 Receptor kinase-like Gene Family AT1G75820 51.880 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2133 K00924 - mtr:MTR_4g070950 1294.26