Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2132 ATGCTTCTACTGTTCGAAACACCGGCCGGGTTTGCTATTTTCAAAGTGCTTAATGAAGGAAAGCTTTCTAAAGTTGAGGATTTACAGAACGAGTTTACCACTGCTGATGCTGCTAGAAAGGTGGTCAAATTGAAAGCATTTAACAAATTTGCGAATACTTCCGAAGCTCTAGAGGCAGCTACTTTGCTAATTGATAGCAAAGCTAGCAAGGGTCTGCGCAAGTTTCTACGTGTTCATTGTGAAAATGAAACGTTAGGTGTTGCTGACTCAAAGCTTGGGAATATCATTAAGGAGAAATTGAAAATCGAATGTGTTCACAACAATGCTGTTATGGAGTTGATGAGAGGTGTCAGATATCAATTGAATGAACTCATAGCAGGTCTAGCTGTTCAAGACATGGCCCCTATGAGCTTGGGTTTGTCTCATAGCTTATCCAGATACAGGCTGAAGTTTAGCGCCGACAAGGTGGATACTATGATCGTTCAGGCTATTGGTTTGCTTGATGATCTTGATAAAGAGCTGAACACGTATGCCATGAGGGTTCGTGAATGGTATGGTTGGCATTTTCCAGAACTTACCAAAATCATAGTTGACAACATCCAATATGCAAGGTCTGTCAAGTTGATGGGTAATCGCATTAATGCTGCTAAGCTTGATTTCTCTGAGATTTTGTCAGAGGAGGTTGAGGCAGAGGTGAAGGAAGCTTCAGTGATATCAATGGGAACTGAAATTGGTGAGCTTGATTTGTCAAATATTAGAGAGCTCTGTGATCAGGTTTTGTCTCTATCAGAATACAGAGCTCAACTCTATGATTATCTCAAGAGTAGGATGAACACCATTGCACCCAATTTGACTGCTATGGTTGGGGAGCTTGTTGGTGCTCGACTCATTGCCCATGGAGGAAGCCTAATAAATCTTGCAAAGCAGCCTGGTAGTACTGTGCAGATTCTTGGTGCTGAGAAAGCTCTTTTTAGAGCACTGAAGACTAAGCATGCAACTCCAAAGTATGGTCTCATCTACCATGCATCCTTGATTGGTCAGGCCGCTCCAAAGTTCAAGGGGAAAATTTCTCGGTCACTTGCTGCAAAGACTGCTTTGGCTATCAGGTGTGATGCATTGGGTGACGGGCAAGATAACACCATGGGATTGGAAAACAGAGCCAAGCTGGAAGCACGTTTGAGGAATCTCGAAGGCAAAGAACTAGGCCGCTTTGCCGGTTCTGCTAAAGGGAAGCCCAAGATCGAAGCATATGATAAGGATAGAAAGAAAGGAGCCGGAGGACTGATAACTCCAGCTAAGACATATAATACTGCAGCCGATTCAGTTATTGAACCAATGTCTAATTCTGCAATGGATGAAGATACACCAGAGCCTCCTGTTACTGACAAAAAGAAAGAAAAGAAGGAAAAGAAAGAAAAGAAGAAAAAGGAGAAAAAGGAAGAGGAGGTTGAAGATGTTGAGGAACCAGAAGAGGAAGTTGTTAAGAAAGAAAAGAAGAAGAAAAAGAAAGATTCTACTGAAAAGGCAGAGGTGCAGAATGGAGACCATACTTCGAATGGAGGAGAAAAGAAGAAAAAGAGGAAGAAGCAGGCAGAGGAGGAAGACTCTGCTGAGATGCCGCCGAGCAAAAAGAAAGATAAAAAGAAGAAAAGAGCCGAGTAG 1662 0.4254 MLLLFETPAGFAIFKVLNEGKLSKVEDLQNEFTTADAARKVVKLKAFNKFANTSEALEAATLLIDSKASKGLRKFLRVHCENETLGVADSKLGNIIKEKLKIECVHNNAVMELMRGVRYQLNELIAGLAVQDMAPMSLGLSHSLSRYRLKFSADKVDTMIVQAIGLLDDLDKELNTYAMRVREWYGWHFPELTKIIVDNIQYARSVKLMGNRINAAKLDFSEILSEEVEAEVKEASVISMGTEIGELDLSNIRELCDQVLSLSEYRAQLYDYLKSRMNTIAPNLTAMVGELVGARLIAHGGSLINLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIYHASLIGQAAPKFKGKISRSLAAKTALAIRCDALGDGQDNTMGLENRAKLEARLRNLEGKELGRFAGSAKGKPKIEAYDKDRKKGAGGLITPAKTYNTAADSVIEPMSNSAMDEDTPEPPVTDKKKEKKEKKEKKKKEKKEEEVEDVEEPEEEVVKKEKKKKKKDSTEKAEVQNGDHTSNGGEKKKKRKKQAEEEDSAEMPPSKKKDKKKKRAE* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2132 553 Gene3D - 129 284 - -
Mtr4g2132 553 PANTHER NUCLEOLAR PROTEIN 58 1 551 - -
Mtr4g2132 553 MobiDBLite consensus disorder prediction 407 431 - -
Mtr4g2132 553 Coils Coil 460 486 - -
Mtr4g2132 553 MobiDBLite consensus disorder prediction 446 553 - -
Mtr4g2132 553 Gene3D Nop domain 285 397 IPR042239 -
Mtr4g2132 553 SUPERFAMILY Nop domain 153 397 IPR036070 -
Mtr4g2132 553 ProSiteProfiles Nop domain profile. 280 398 IPR002687 -
Mtr4g2132 553 MobiDBLite consensus disorder prediction 491 543 - -
Mtr4g2132 553 SMART NOSIC_2 159 211 IPR012976 -
Mtr4g2132 553 MobiDBLite consensus disorder prediction 456 482 - -
Mtr4g2132 553 Pfam NOP5NT (NUC127) domain 2 65 IPR012974 -
Mtr4g2132 553 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 551 IPR045056 GO:0030515|GO:0031428|GO:0032040
Mtr4g2132 553 Pfam snoRNA binding domain, fibrillarin 166 394 IPR002687 -
Mtr4g2132 553 MobiDBLite consensus disorder prediction 412 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2132 Mtr-Chr4 34845030 34849865 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2132 K14565 - gmx:100784721 823.157