Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2129 ATGTCCAGCCCCATCGATCGTTTCGCTCTTCCATGTTTTGAAGGTTCTTCTGGTAGTGATGAAAAAAGAACCGAAAGAAAATCTGATTTTAAGATTTCTGGTAGTTCTAGTAATGGTGGTGGTTCTCTTAAGAAGAAAGTTTCTTCCAAGATTAAGCATTCTCTCAAGAAAAAGAGTGGTAGAAGAAAGAGTGATGGACGTGTTAGTTCTGTTTCCATTGAGGATATTCGTGATGTTGAGGAGCTTCAAGCTGTTGATGCCTTTCGACAATCATTGATCGCCGAGGAATTGCTTCCGAAAAAGCATGATGATTATCATTTGATGCTAAGATTTCTTAAAGCAAGGAAGTTTGATATTGAAAAAGCAAAGAATATGTGGGCTGATATGCTACAATGGAGGAAGGAATTTGGTGCTGATACAATTATGGAGGATTTCGAGTTCAACGAAATAAATGAAGTTGTTAAGTATTATCCACATGGGCATCATGGTGTTGATAAGGAGGGAAGGCCTGTTTACATTGAAAGACTTGGAAAAGTGGATCCAAACAAACTTATGCAAGTTACAACTATGGATAGATATGTGAAGTACCATGTACGCGAGTTTGAGAAATCTTTTGCGATTAAGTTTCCTGCTTGCACAATTGCTTCCAAGAGGCACATAGATTCCAGTACCACAATCTTAGATGTTCAAGGCGTGGGCCTTAAGAACTTTTCAAAAGCTGCCCGCGAACTCATTATGCGATTGCAAAAGATTGATGGTGACAATTACCCTGAGACTCTTCACCAAATGTTTATCATAAATGCTGGCCCTGGGTTTAGGATGCTCTGGAACAGTGTCAAATCTTTTATCGATCCCAAAACAACTTCAAAGATTCATGTTCTTGGAAACAAGTACCAAAGCAAATTGCTTGAAGTAATCAATGCTAGCGAGTTGCCAGAATTTTTGGGAGGTACCTGCACATGTTTAGATCAGGGAGGATGCCTCAGGTCCGACAAAGGGCCCTGGAATAACCCGGAAATTATGAAGATGATTCTCAGTGGTGAAGCAGGGCGGCCGAGGCAGGTGGTAAAAGTTCTAAACAGTGAAGGGAAAGTTATTGCATATGCCAAGCCACGATGCCCAATGGTAAAAGGCAGTGATACATCCACAGCTGAATCGGGCTCTGAAGCTGAAGACATAGCTTCTCCAAAGGTGGTGAAGAGTTACTCACACCTGAGGTTGACCCCTGTTCGTGAGGAAGCTAAGGTAGTTGGAAAGTCAAGCTATGCTGTTAGTGGTGACTTAGCTGGGTATGACGAATACATTCCAATGGTGGACAAAGCTGTTGATGCTGTCTGGAAGAAGCAAGCATCACTCCATAGGTCTCATAGTACAAAAGGAACACCTCCTCTTCCTGACACGCCAAAACTACCAGAGGGTATTCAAGCTCGGATTTGGGTAGCCCTGACTGTTTTCTCTTGGACAATGTTTAGTCTCTTCCGTTCACTTGCATGTCGTATGACCAAAAAACTGCCATCAGTATCATCTAATAATTATCAGAGTACTTCAGAGCTAACTCTTGACACAACAAACAAGGAAGACTATACCGAGACCAGTGTCTTTTGCTCCATGATGAAAAGGTTAGGTGAACTTGAAGAGAAGGTTGACACACTAAAATCTAAGCCCTCTGAGATGCCTAGACAGAAAGCAGAATTACTAAATGTTGCTGTCTACCGGGTGGATGCTTTGGAAGCAGAGCTAATCGCAACCAAAAAGGCTCTCTATGAAGCGTTAATGAGGCAAGAAGAGCTGCTTGCTTACATTGATAGTCAAGAAGAAGCAAAGTTACGGAAGAAGAAATTTTGCTGGTGA 1851 0.4192 MSSPIDRFALPCFEGSSGSDEKRTERKSDFKISGSSSNGGGSLKKKVSSKIKHSLKKKSGRRKSDGRVSSVSIEDIRDVEELQAVDAFRQSLIAEELLPKKHDDYHLMLRFLKARKFDIEKAKNMWADMLQWRKEFGADTIMEDFEFNEINEVVKYYPHGHHGVDKEGRPVYIERLGKVDPNKLMQVTTMDRYVKYHVREFEKSFAIKFPACTIASKRHIDSSTTILDVQGVGLKNFSKAARELIMRLQKIDGDNYPETLHQMFIINAGPGFRMLWNSVKSFIDPKTTSKIHVLGNKYQSKLLEVINASELPEFLGGTCTCLDQGGCLRSDKGPWNNPEIMKMILSGEAGRPRQVVKVLNSEGKVIAYAKPRCPMVKGSDTSTAESGSEAEDIASPKVVKSYSHLRLTPVREEAKVVGKSSYAVSGDLAGYDEYIPMVDKAVDAVWKKQASLHRSHSTKGTPPLPDTPKLPEGIQARIWVALTVFSWTMFSLFRSLACRMTKKLPSVSSNNYQSTSELTLDTTNKEDYTETSVFCSMMKRLGELEEKVDTLKSKPSEMPRQKAELLNVAVYRVDALEAELIATKKALYEALMRQEELLAYIDSQEEAKLRKKKFCW* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2129 616 MobiDBLite consensus disorder prediction 1 67 - -
Mtr4g2129 616 Pfam CRAL/TRIO domain 156 317 IPR001251 -
Mtr4g2129 616 Gene3D - 57 136 - -
Mtr4g2129 616 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 149 323 IPR001251 -
Mtr4g2129 616 MobiDBLite consensus disorder prediction 46 63 - -
Mtr4g2129 616 CDD SEC14 147 318 IPR001251 -
Mtr4g2129 616 PRINTS Cellular retinaldehyde-binding protein signature 107 129 - -
Mtr4g2129 616 PRINTS Cellular retinaldehyde-binding protein signature 276 295 - -
Mtr4g2129 616 PRINTS Cellular retinaldehyde-binding protein signature 309 318 - -
Mtr4g2129 616 Gene3D - 137 347 IPR036865 -
Mtr4g2129 616 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH8 3 613 - -
Mtr4g2129 616 Pfam CRAL/TRIO, N-terminal domain 99 128 IPR011074 -
Mtr4g2129 616 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 3 613 - -
Mtr4g2129 616 SUPERFAMILY CRAL/TRIO N-terminal domain 79 145 IPR036273 -
Mtr4g2129 616 SMART sec14_4 149 320 IPR001251 -
Mtr4g2129 616 SUPERFAMILY CRAL/TRIO domain 149 343 IPR036865 -
Mtr4g2129 616 SMART CRAL_TRIO_N_2 104 129 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2129 Mtr-Chr4 34800454 34805746 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2129 83 314 Acyl Lipid Metabolism Gene Families AT5G47730 27.801 4.25e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2129 - - gmx:100785793 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2129 4 34800454 34805746 Mtr4g2129 4 34800454 34805746 ECH