Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2117 ATGGCAGTCAATGAAACAAATATAAAGAGCTCTCTTCATATTCGCAGCAACAGCTTACCCTCCACACCTCACCCTCTTATATCATATTTTGAGAACAATTTGCAAATATTGAAGAGTTATGAAGGTGACTCTTCAGTGTCATCATCTTCGGTATGCAACAACCTTAATGGCATGCAGGATTTGCATGACTGCATCGATAAGTTCCTTCAAATGCCAATTGAACAACAAGCCTTATCACAGGAATGCAATGAAAAATGTGTCGATGACCTACTAGAAAGTTCTCTTAGAATATTGGATATCTGCAGCACAACCAAAGATTGCCTTTCGCTATCAAAGGAAAACATTCAAGAACTACAGTCGGTCATCAGAAGAAAGAGAGGAGTTGAAACTGGATTAGCAGTTGAGGGTGTAAAATATTTGGCTTTAAGGAAGACCACAAAGAAGCAAATTCAAAAGGCCTTTCTAAAATTGAAAGAAATGAAGGAGGAGTTGATTGCTTCGTCCTTAAACAAAAAGGACAATAATTCTTCACCTATGCTTGGATTCTTGAAAAAAGCAGAAGAAGTCACTGTGAGCTCACTAGAGCATTTGTTGCTATTTATCTCTAATCCAAAAGGACACTCAAATAACAAAAGATGGTCAGCAATATCCAAGTTGATGCATTCTAAAAGAGTAGTTTGTGACTCTCAATATTCAGACACAAATGAATTTGAGAAAGTGGATGCAACTTTGCTGTCTCTCATCAGCCACAACCCTTCATCTACTGAAAATTTTCAAAGTCATTTGGAAGATTTGGAGATGTGCATTCAAGATCTAGAAATAGGAGTTGAACAAATATCAAGAAAATTAATTAGAAATAGAGTTTCACTTCTTAACATCTTTAACCACTAA 891 0.3625 MAVNETNIKSSLHIRSNSLPSTPHPLISYFENNLQILKSYEGDSSVSSSSVCNNLNGMQDLHDCIDKFLQMPIEQQALSQECNEKCVDDLLESSLRILDICSTTKDCLSLSKENIQELQSVIRRKRGVETGLAVEGVKYLALRKTTKKQIQKAFLKLKEMKEELIASSLNKKDNNSSPMLGFLKKAEEVTVSSLEHLLLFISNPKGHSNNKRWSAISKLMHSKRVVCDSQYSDTNEFEKVDATLLSLISHNPSSTENFQSHLEDLEMCIQDLEIGVEQISRKLIRNRVSLLNIFNH* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2117 296 PANTHER BPS1-LIKE PROTEIN 9 295 - -
Mtr4g2117 296 Coils Coil 262 282 - -
Mtr4g2117 296 Pfam Protein BPS1 55 293 IPR004320 GO:0048364|GO:0048367
Mtr4g2117 296 Coils Coil 143 163 - -
Mtr4g2117 296 PANTHER DUF241 DOMAIN PROTEIN 9 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2117 Mtr-Chr4 34700164 34701266 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2117 - - gmx:100783166 375.555