Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2108 ATGAGTACAAATCAACAAGAACATGTTCAGATCCATACAAATCGAAGATTACCAGATTTCCTCCAAAGTGTAAATCTCAAATACGTTAAACTAGGTTACCATTACCTAATCACACATCTTTTAACACTTTGTTTAATCCCTCTTATGTCCGTAATCATAATCCAAGTTTCACAAATGAACCCAAACGAAATCCACCAACTCTGGCTCCACCTCAAATACAATCTCGTAAGCATCATCACATGTTCCGCTATTCTTGTTTTCGGATCCACCGTTTACATCATGACCCGACCCAGATCCATTTACCTCATCGATTTCTCTTGTTACAAACCACCTTCAAATCTTGCTGTTAAGTTTACCAAATTCATTCAACACTCCAAACTCAAAGGTGATTTCGATGAATCTTCTTTGGAGTTTCAGCGTAAGATTCTTGAACGTTCTGGTCTTGGTGAAGATACTTATTTACCTGAAGCTATGCATAAGATTCCACCTACTCCGTGTATGGCTTCAGCTAGAGAAGAAGCTGAACAGGTTATGTATGGTGCTCTTGATAATCTTTTTGCTAATACAAAGATTAAGCCTAAAGATATTGGTATACTTGTTGTTAATTGTAGTTTGTTTAATCCAACGCCATCACTTTCAGCTATGATTGTTAACAAATATAAATTAAGGGGTAATATTAGAAGTTTTAATTTGGGTGGTATGGGTTGTAGTGCTGGTGTTATAGCTATTGATCTTGCTAAAGATATGCTTCAAGTTCATAGAAATACTTATGCTGTTGTTGTTAGTACTGAGAATATTACTCAAAATTGGTATTTTGGTAATAAGAAATCTATGTTGATTCCGAATTGTTTGTTTCGCGTTGGTGGTGCCGCGGTTCTGCTTTCGAACAAAGGCTGTGATAGAAGCAGGGCTAAGTATAAGCTTGTTCATGTTGTGAGGACTCATAAAGGTGCTGATGATAAAGCATTTAAGTGTGTTTATCAAGAACAAGACGATGTTGGGAAAACTGGTGTGTCTTTGTCTAAAGATCTTATGGCTATTGCTGGTGGTGCTCTTAAGACGAATATAACAACTTTGGGTCCTCTTGTGTTACCTGTTAGTGAACAGCTTTTGTTTTTTACTACTTTGGTTATTAAGAAATGGTTTAATGCAAAAACTAAGCCTTATATACCTGATTTTAAGCTTGCTTTTGAGCATTTTTGTATTCATGCTGGTGGTAGAGCTGTGATTGATGAGCTTGAGAAGAATTTGCAGCTTATGCCTGATCATGTTGAGGCATCTAGAATGACTTTGCATAGATTTGGCAATACTTCTTCAAGTTCAATTTGGTATGAATTGGCTTACATTGAAGCTAAAGGAAGGATGAGAAAGGGAAACAGAATTTGGCAGATTGCATTTGGGAGTGGTTTCAAGTGTAACAGTGCTGTGTGGCAGGCTATGAAACATGTGAAAGCTTCACCTATGAGTCCATGGGAAGATTGCATTGATAGGTATCCAGTTGAGATTGTTTCTTAG 1515 0.3703 MSTNQQEHVQIHTNRRLPDFLQSVNLKYVKLGYHYLITHLLTLCLIPLMSVIIIQVSQMNPNEIHQLWLHLKYNLVSIITCSAILVFGSTVYIMTRPRSIYLIDFSCYKPPSNLAVKFTKFIQHSKLKGDFDESSLEFQRKILERSGLGEDTYLPEAMHKIPPTPCMASAREEAEQVMYGALDNLFANTKIKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGAAVLLSNKGCDRSRAKYKLVHVVRTHKGADDKAFKCVYQEQDDVGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPVSEQLLFFTTLVIKKWFNAKTKPYIPDFKLAFEHFCIHAGGRAVIDELEKNLQLMPDHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRIWQIAFGSGFKCNSAVWQAMKHVKASPMSPWEDCIDRYPVEIVS* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2108 504 PANTHER 3-KETOACYL-COA SYNTHASE 4 9 503 - -
Mtr4g2108 504 SUPERFAMILY Thiolase-like 86 303 IPR016039 GO:0016746
Mtr4g2108 504 SUPERFAMILY Thiolase-like 309 478 IPR016039 GO:0016746
Mtr4g2108 504 CDD CHS_like 82 477 - -
Mtr4g2108 504 Pfam FAE1/Type III polyketide synthase-like protein 92 380 IPR013601 GO:0006633|GO:0016020|GO:0016747
Mtr4g2108 504 PIRSF Very_long_ch_3-ktacl-CoA_syn 19 504 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mtr4g2108 504 PANTHER 3-KETOACYL-COA SYNTHASE 9 503 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mtr4g2108 504 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 398 478 IPR013747 -
Mtr4g2108 504 Gene3D - 110 479 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2108 Mtr-Chr4 34584968 34587205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2108 10 502 Miscellaneous Gene Families AT1G19440 82.353 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2108 K15397 - cit:102626149 891.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2108 4 34584968 34587205 Mtr4g2108 4 34584968 34587205 ECH