Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2091 ATGGCTGCAACTTCCAACCCTTCATTCCTCCTTTGTCTTTCCCTCATCACCACCACCATCTACTTTGCTGATTCACAATCCTTCATCGGAGTAAACTATGGTCAAGTCGCCGACAACCTTCCGCCACCTTCCGCAACCGCCAACCTCCTCAAATCAACCTCCATCGGAAAACTCCGTCTCTACAACGCTGATCCGTCAATCATCAAATCCCTCTCAAACTCCGGCATCGGAATCACCATCGGAGCTGCCAACGGCGACATTCCGATTCTGGCCTCAAATCCCAACTCAGCAACTCAATGGGTTAACTCAAATGTTTTACCATATTACCCTTCTAGCAACATCACTCTCATCACCGTCGGTAACGAAGTTATGACCTCCGGCGATAATGCTCTCATATCAAACCTTCTTCCGGCGATACAAAATGTCCAAAATGCCCTTAACTCAGCTTCACTCGGTGGCAAAATCAAAGTTTCCACCGTTCATTCTATGGCTGTGTTGACTCAGTCGGATCCTCCATCTTCCGGGTCGTTTGACCCGAATCTGAAAGACACAATGAAGCAGATGCTGGAGTTTCTGAAGGATAATAAAGCTCCGTTTACTATTAACCCGTACCCGTTTTTCGCTTACCAGAGTGACCCGAGATCTGAAACACTTGCGTTCTGTTTGTTTCAGCCAAATTCGGGTCGGGTTGATTCGGGTAACGGTAAACTTTACACGAACATGTTCGATGCTCAGGTTGATGCTGTACATTCTGCTTTAAGTGGAATGGGATTCCAAGACATAGAAATTGTGGTAGCTGAAACAGGATGGCCCTCACGTGGAGACAACAATGAAGTAGGACCAAGTGTTGAAAATGCCAAAGCCTATAATGGGAACCTTATCACACACCTTAGATCATTGGTTGGTACACCTTTGATGCCAGGAAAATCCATTGACACATACATTTTTGCACTCTATGATGAAGATTTGAAACCTGGCGCTGGATCTGAACGTGCGTTTGGTCTTTACAAAACTGATCTTACTGTGGCATATGATGTTGGATTAGACAAATCTACCCAAAAGGGTCCTCCATCAACTAGTCCAAATGCTCCTGTTACTCCAGCACCTAAAACCACATCACAATGGTGCATTCCAAAAGGGGGAGTAAGTGATGATCAACTGCAGGCAAATCTTGACTATGCCTGCAGTAGAGAAGGCATGGATTGTGGGCCAATTCAACCAGGAGGTGCTTGTTATGATCCTAATACAGTAGCATCTCATTCTGCCTTTGCCATGAATCTTTATTACCAAAAGTTTGGTAGAAATCCTTGGAATTGTGATTTCTCTCAAACAGCTAGTCTTACATCCCAAAATCCAAGTTACAATGGTTGCACTTATCCAAGTGGAAGTACCTGA 1395 0.448 MAATSNPSFLLCLSLITTTIYFADSQSFIGVNYGQVADNLPPPSATANLLKSTSIGKLRLYNADPSIIKSLSNSGIGITIGAANGDIPILASNPNSATQWVNSNVLPYYPSSNITLITVGNEVMTSGDNALISNLLPAIQNVQNALNSASLGGKIKVSTVHSMAVLTQSDPPSSGSFDPNLKDTMKQMLEFLKDNKAPFTINPYPFFAYQSDPRSETLAFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSGMGFQDIEIVVAETGWPSRGDNNEVGPSVENAKAYNGNLITHLRSLVGTPLMPGKSIDTYIFALYDEDLKPGAGSERAFGLYKTDLTVAYDVGLDKSTQKGPPSTSPNAPVTPAPKTTSQWCIPKGGVSDDQLQANLDYACSREGMDCGPIQPGGACYDPNTVASHSAFAMNLYYQKFGRNPWNCDFSQTASLTSQNPSYNGCTYPSGST* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2091 464 MobiDBLite consensus disorder prediction 352 372 - -
Mtr4g2091 464 Pfam Glycosyl hydrolases family 17 29 346 IPR000490 GO:0004553|GO:0005975
Mtr4g2091 464 Gene3D Glycosidases 28 355 - -
Mtr4g2091 464 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 456 IPR044965 GO:0004553|GO:0005975
Mtr4g2091 464 MobiDBLite consensus disorder prediction 348 372 - -
Mtr4g2091 464 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 7 13 456 - -
Mtr4g2091 464 Pfam X8 domain 374 445 IPR012946 -
Mtr4g2091 464 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Mtr4g2091 464 Gene3D - 370 460 - -
Mtr4g2091 464 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
Mtr4g2091 464 SMART X8_cls 374 459 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2091 Mtr-Chr4 34441600 34446359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2091 23 460 Miscellaneous Gene Families AT2G16230 65.753 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2091 - - gmx:100778892 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2091 4 34441600 34446359 Mtr4g2091 4 34441600 34446359 ECH