Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2061 ATGGCGGTTCTTACGCGTGTAACTTCAAAACTTGGAGCAAAGTATCGTACTCTAGCTCCTTTTAGATTTCTAAGGGGTTTGGTGTGTCTACTGGTGCTGGTTTCATCAGCATTTGTAACATTGGTGTTCTTTGGTTTTATTAGTTCTGTTATAATGCGATTTTTTAGCATCAGTTACAGCAGGAAAACAACGTCCTTTTTCTTTGGTACTTGGCTAACTTTGTGGCCCTTTCTATTTGAGAAAATCAACAAGACTAAAGTTGTGTTCTCTGGAGATATTGTTCCTTCAAGAGAACGGATTGTACTGATCGCAAATCACCGAACTGAAGTCGACTGGATGTACTTATGGGACATTGCGTTGCGGAAGGGATGCATTGGATACATTAAATATGTACTTAAGAGCAGCTTGATGAGACTTCCAATTTTTGGTTGGGCATTTCACATACTAGAGTTCATCCCAGTGGAAAGGAAGTGGGAAGCTGATGAGTCAAATATGCGTCGAATGCTTTCTACATTAAATGATCCCCAAGATCCTCTTTGGCTTGCTATTTTCCCTGAAGGCACCGATTTTACTGAGCAGAAGTGCCTTCGAAGTCAAAAATATGCGGCTGAACACGGGTTACCGATTCTGAAAAATGTTTTACTGCCGAAAACCAAGGGCTTTTGTACATGTTTGCAAGAGTTGCGAGGCTCTCTAAATGCAGTTTACGACGTTACCATTGGCTACAAATACCGCTGCCCGTCTTTCTTGGACAATGTATTTGGAGTGGATCCTTCCGAAGTTCATATCCATATCTGCCGCTTTCCCATCGACTGTATCCCAACATCCGAAGATGAAATTTCCACGTGGTTGATGGATAGATTCCGATTTAAGGACAAGTTGCTTTACAATTTTCAATTTGAAGGCCAGTTTCCTGATCAAGCAAAAGAGAGGGACCTCCCTGCTATGAAGGGAATTTTAAATTGTGTGACAGTGATTATATTGACCGGCTTATGCATGTACTTCACTTTTTCCTCTGTCTGGTTTAAACTTTATGTGTCTGTAGTCATCGCTTATTTGGTTCCGGCTACATATTTCAACATTCGGCCACAACCCATTCTTCGAGTTTTTAAGATGTGA 1119 0.4111 MAVLTRVTSKLGAKYRTLAPFRFLRGLVCLLVLVSSAFVTLVFFGFISSVIMRFFSISYSRKTTSFFFGTWLTLWPFLFEKINKTKVVFSGDIVPSRERIVLIANHRTEVDWMYLWDIALRKGCIGYIKYVLKSSLMRLPIFGWAFHILEFIPVERKWEADESNMRRMLSTLNDPQDPLWLAIFPEGTDFTEQKCLRSQKYAAEHGLPILKNVLLPKTKGFCTCLQELRGSLNAVYDVTIGYKYRCPSFLDNVFGVDPSEVHIHICRFPIDCIPTSEDEISTWLMDRFRFKDKLLYNFQFEGQFPDQAKERDLPAMKGILNCVTVIILTGLCMYFTFSSVWFKLYVSVVIAYLVPATYFNIRPQPILRVFKM* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2061 372 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 37 215 - -
Mtr4g2061 372 Pfam Acyltransferase 91 243 IPR002123 GO:0016746
Mtr4g2061 372 Pfam Acyltransferase C-terminus 254 309 IPR032098 -
Mtr4g2061 372 CDD LPLAT_LCLAT1-like 76 265 - -
Mtr4g2061 372 SMART plsc_2 100 222 IPR002123 GO:0016746
Mtr4g2061 372 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 371 - -
Mtr4g2061 372 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 1 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2061 Mtr-Chr4 34132133 34135752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2061 14 365 Miscellaneous Gene Families AT1G75020 60.623 3.23e-157 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2061 K13513 - gmx:100814885 629.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2061 4 34132133 34135752 Mtr4g2061 4 34132133 34135752 ECH