Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2058 ATGTGTCACATGATGTCTTTGAGGAGTCCTATGAATCAATGTCTTCTCAAAGTTCCCACTTTTCATCCTTTGTTCAAATACAACAGAATTCATAGTCATCGTCATAACACCTTCTCATTCACCATCAGCTGCAACCTCAAAAACAAGGGAAAGAATAATAGCTTGTTGTCACAGAAGATTGTTTTATCAGAATCTTCTCCTCCACCACTCACACAGGATAATGATGATATCAACAATGGAAATGTTCCAGCAAGCTCAAAGAACCAGAAAGGTCCTTATGGTGTGGTCAAAAAGTTGAGTAAAAAGGTGTTGCAGATTCTCTCTAATTTGCCTTTGGCTATTGGAGAAATGTTCATCATTGCTTTTTTAATGGGTTTAGGCACTTTTATTGACCAAGGCGAGAAACCTGAGTTTTATTTCCAGAATTACCCTGAAGATCATCCCGTGTTAGGATTTTTTACTTGGAGATGGATTTTCTTCCTTGGTTTTGATCACATGTATTCAGCCCCTATATTTCTTTCAATGTTGGCCCTTCTTGGTGCATCCCTTATAGCCTGCACTTACACAACACAACTCCCACTCATCAAGGTTTCAAAAAGATGGTCGTTTATCCACTCTGCCGAGGCTATACGTAAGCAAGAATTTTCAGAATCATTGCCGAGAGCATCAATTCAAGACGTCGGTACTATATTAATGGGAGCTGGATATGAGGTATTCTTGAAAGGACCAACTTTGTATGCTTTTCGTGGACTTGCCGGTCGGCTAGCTCCTGTTGGTGTTCATATAGCACTGCTGTTGATAATGGGTGGAGGAACTTTAAGTGCTGCAGGGAGCTTTAAAGGTTCAGTCACTGTGCCTCAGGGGCTGAATTTTGTTGTAGGAGACGTTCTCGGTCCTACCGGCTTTCTTTCCCTTCCAACTGATGCTTTTAATACAGAGATTCATGTCAACAGATTCTCTATGGATTATTATGAAAGTGGGGAGGTTTCACAGTTCCACACCGATCTTTCCCTCTTGGACATGGATGGAAAAGAAGTAATGAGGAAAACAATTAGTGTAAACGACCCTTTAAGATACGATGGTATCACTATATACCAGACGGATTGGAGTATTTCAGCTCTGCAAATTCTCAAGGACAATGAAGGACCTTATAACTTGGCTATGGCACCTCTAAAGATCAATGGAGATAAGAAACTTTATGGTACCTTTCTACCTGTTGGAGATGTTAACTCTCCTGATGTTAAGGGAATATCTATGCTTGCTCGTGACCTGCAGTCAATTGTCCTTTATGACAAGGAAGGGAAATTTGCAGGAGTTAGACGACCTAATTCAAAGCTCCCAATCAACATCGATGGCTCAGAAATTGTCGTCGTTGATGCAATAGGCAGTAGTGGCTTGGACTTGAAGACTGACCCTGGTGTGCCAGTTGTATATGCTGGATTTGGTGCTCTCATGCTCACTACATGCATCAGCTATTTATCTCATTCCCAGATATGGGCTTTACAAGATGGGACAACAGTCGTTATTGGAGGGAAGACTAATAGATCAAAGTTAGAGTTTCCAGACGAGATGAACCTCTTGCTTGATAAAATCCCTGAAATAGTTGAATCATCATCTCTATCTAAGCAAACTGATAGCATGGTTGGCTAG 1650 0.4109 MCHMMSLRSPMNQCLLKVPTFHPLFKYNRIHSHRHNTFSFTISCNLKNKGKNNSLLSQKIVLSESSPPPLTQDNDDINNGNVPASSKNQKGPYGVVKKLSKKVLQILSNLPLAIGEMFIIAFLMGLGTFIDQGEKPEFYFQNYPEDHPVLGFFTWRWIFFLGFDHMYSAPIFLSMLALLGASLIACTYTTQLPLIKVSKRWSFIHSAEAIRKQEFSESLPRASIQDVGTILMGAGYEVFLKGPTLYAFRGLAGRLAPVGVHIALLLIMGGGTLSAAGSFKGSVTVPQGLNFVVGDVLGPTGFLSLPTDAFNTEIHVNRFSMDYYESGEVSQFHTDLSLLDMDGKEVMRKTISVNDPLRYDGITIYQTDWSISALQILKDNEGPYNLAMAPLKINGDKKLYGTFLPVGDVNSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVVVDAIGSSGLDLKTDPGVPVVYAGFGALMLTTCISYLSHSQIWALQDGTTVVIGGKTNRSKLEFPDEMNLLLDKIPEIVESSSLSKQTDSMVG* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2058 549 MobiDBLite consensus disorder prediction 66 89 - -
Mtr4g2058 549 MobiDBLite consensus disorder prediction 66 88 - -
Mtr4g2058 549 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 100 529 IPR023494 -
Mtr4g2058 549 Pfam ResB-like family 411 524 IPR007816 -
Mtr4g2058 549 Pfam ResB-like family 112 376 IPR007816 -
Mtr4g2058 549 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 65 538 IPR023494 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2058 11 544 Miscellaneous Gene Families AT1G49380 66.910 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2058 K07399 - gmx:100807003 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2058 4 34092811 34097414 Mtr4g2058 4 34092811 34097414 ECH