Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2052 ATGGAGGCTTTCTCAGTCACCTCAACTACCATTCCCTCCTCTCTAACACGTAGAGAGGCTGCAGCAGTTAAACCTTCTGGCCATGTCAACCTTTCCAAATACTCACATTTCATCAACTATCCTTTCACCACAACACCTTGCAAGAACAGAATCCGTAGCAATATCATAAGGGCTCAAGTTTCAGGTTCAACAAAATCTAGTACTGCTGAGGGGATTCCTGAGAAAAAAGATTCCAAGGATGATAATTTAGTATTTGTTGCTGGTGCTACTGGAAAAGTTGGTTCAAGAACAGTCAGGGAGCTTATAAAGCTTGGTTTTAAAGTCAGAGCTGGCGTAAGGAGTGCGCAGAGAGCTGGTTCATTGGTTCAGAGTGTTAAACAATTGAAGCTTGATGGTACAAGTGGAGGGAGTGAAGCTGTAGAGAAGCTTGAAATTGTGGAATGTGATTTGGAGAAGCCAGAACAGATTAAATCAGCATTAGGGAATGCATCAACTGTAATATGCACCATTGGTGCCAGTGAGAAGGAAATTTTCGACATTACCGGACCTTATCGAATAGATTACATGGCCACCAAAAACCTAGTTGATGCCGCATCTGTTGCCAAAGTAAATCACTTCATATTGGTTACTTCACTGGGAACAAACAAATTTGGTTTTCCTGCAGCTATTCTCAATTTATTTTGGGGAGTCTTGTGTTGGAAAAGGAAGGCAGAAGAAGCATTGCTAGCAAGTGGACTTCCATACACAATAGTGAGACCTGGAGGCATGGAGAGGCCTACTGATGCTTACAAGGAAACTCATAATGTAACCCTATCAACTGAAGATACTTTATTTGGTGGTCAAGTGTCAAACCTTCAGGTTGCTGAACTCATGGCAGCCATGGCTAAGAATCCCGAACTTTCATATTGTAAAATAGTGGAGGTCATTGCCGAGACAACTGCGCCATTGACACCTGCGGAAAAACTTCTTGCGAAGATACCTTCTCAACGCCCTTACATTCCTTCACCTAAGGTACAGGAACCAGATACTGCAGCTGTTAGTAGTCCAGCTCCCTCAGCTAATGTCACGGAAGCAGTACCTAGCATTGCCCCTCAGAAAGAAACAGAACAACCAGAACCAGTGGCAGAAGTACCTAGCATCACTCCTCAGAAAGAAACAGAACAACCGAAACTAGTGGCAAAACAGCCGCTTTCTCCTTATACTGCTTATGAGGATTTAAAACCACCGTCATCCCCTTCCCCAGTTAAGCCTAGTGACAAGAAGCAGATAAATATCAGTGATGCAGTGCCAACACCTAGTTCTTCAGATGCTCCAAGTAGCATTCCAGAAATAAATGTCATTTCTCAGACAACAACTTCCTCAAAAGGGAAGGAGTCTCTTTCTCCTTTTGCAGCATATCCCGATTTAAAGCCTCCTAGTTCACCATCTCCTAATGCACCAACTACATCAATATCCACATCTTCTGTGGGTGAGGTGGCCAAGATTGAGGAAGAATCAAGTAATGGCCCAGCTCAACTTTCAGTGGAAGATACCCCAAAGGATGATGGACAGAATCTCCATGAGCCAAAGTCAAGACCACTTTCACCTTATGCAATGTATCCTGATTTAAAGCCTCCTAGTTCACCATCTCCTAATGCACCAAATACATCTTCTGTGGGTTTGGTGCCCAATATTGATGCAGTATCCACATCTTCTGTGGGTGAGGTGCCCAATATTGATGCAGTATCCACTTCTTCTGTGGGTGAGGTGCCCAATATTGATGCAGTATCAAGCAATGGACCAGCCCAACTCTCCGTGGAAGATACACCAAAGGAGGATGGACAGGATCTCCATGAACCAAAGTCAAGACCACTTTCACCTTATGCAATGTATGAGGACTTGAAGCCTCCTGCATCACCATCACCTTCCTTCAGACAATCCTAG 1923 0.4394 MEAFSVTSTTIPSSLTRREAAAVKPSGHVNLSKYSHFINYPFTTTPCKNRIRSNIIRAQVSGSTKSSTAEGIPEKKDSKDDNLVFVAGATGKVGSRTVRELIKLGFKVRAGVRSAQRAGSLVQSVKQLKLDGTSGGSEAVEKLEIVECDLEKPEQIKSALGNASTVICTIGASEKEIFDITGPYRIDYMATKNLVDAASVAKVNHFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALLASGLPYTIVRPGGMERPTDAYKETHNVTLSTEDTLFGGQVSNLQVAELMAAMAKNPELSYCKIVEVIAETTAPLTPAEKLLAKIPSQRPYIPSPKVQEPDTAAVSSPAPSANVTEAVPSIAPQKETEQPEPVAEVPSITPQKETEQPKLVAKQPLSPYTAYEDLKPPSSPSPVKPSDKKQINISDAVPTPSSSDAPSSIPEINVISQTTTSSKGKESLSPFAAYPDLKPPSSPSPNAPTTSISTSSVGEVAKIEEESSNGPAQLSVEDTPKDDGQNLHEPKSRPLSPYAMYPDLKPPSSPSPNAPNTSSVGLVPNIDAVSTSSVGEVPNIDAVSTSSVGEVPNIDAVSSNGPAQLSVEDTPKEDGQDLHEPKSRPLSPYAMYEDLKPPASPSPSFRQS* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2052 640 MobiDBLite consensus disorder prediction 341 363 - -
Mtr4g2052 640 CDD SDR_a5 84 312 - -
Mtr4g2052 640 MobiDBLite consensus disorder prediction 331 555 - -
Mtr4g2052 640 MobiDBLite consensus disorder prediction 416 459 - -
Mtr4g2052 640 Gene3D - 80 329 - -
Mtr4g2052 640 MobiDBLite consensus disorder prediction 479 507 - -
Mtr4g2052 640 MobiDBLite consensus disorder prediction 576 640 - -
Mtr4g2052 640 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 81 309 IPR036291 -
Mtr4g2052 640 MobiDBLite consensus disorder prediction 576 598 - -
Mtr4g2052 640 Pfam NAD(P)H-binding 88 298 IPR016040 -
Mtr4g2052 640 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 5 639 IPR044719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2052 Mtr-Chr4 34036293 34041298 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2052 - - mtr:MTR_4g068970 1210.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2052 4 34036293 34041298 Mtr4g2052 4 34036293 34041298 ECH