Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2046 ATGATATTTAGTTCCAATGAGTCCATGTTATTTGCATTGTCTTGTACTTGGAAAGTGACGAAAACAAAGACTCATTCAGCACTAGAGTCAAAAAAAACAATGGAAGAAGAAGGAATAGGGTTAGTGTTAGCGAGAGCCACAGAACTTAGGTTGAAGATCAACAACTGCATCCAAAAACCAACTTCTTCTCCTAATGGTCTCCTCGAAGACGATGAAGACGAGGATGCTACTGATAGGCTTCTTAACATTTGCGATGCACTCGAAGCTTTGGAGACTCAGCTTTCTTCTCTGCAGGTTCTGCAACAACAGCAGCGGTACGAAAGAGAAATTGCCTTGGCTGAGATTGAAAACAGTCGCAAAGTGTTAATTAACAAGCTCAAGGAGTATAAAGGAAAAGATTTGGAAGTGATACATGAAGCTTCCACTTTTGCCAGTGAAACTGTGGAGCCAAACAATGATCTACTACTTCCTCCTTATCCAACCCGCCCTCCCTATTCCATGTCTCTTGACAAGCAATATCTGTCACAGATCCCTTCTGTCAATAAGTCCGGTCGCAATGGATTAATCACACTTGATAACGTAATCGATGCTAAAAAGAATCCAAATGAAAAAGAGCAAAATTATGTTGAAGATGGGGCTAAAAATTCAAGAAAAGGTTTACGATTTTTTATAACTTCTGCAGCAAAAGCAGTGGTCACAGTTATTGGTGTGGTATCAATATTGAGTATGTCAGGATTTGGTCCTAATTTGCTGAAGACTCGTTGGAATGTACAACGCAGGCATCACAGACTAGAAAATGAGAATGGGAGATCTACCAGTGAAAATAAGGGTGATGGACAGTGTCCACCTGGTAGAGTTTTGGTGCTGGAAAATGGGGAGGCTCGATGTCTTGTGAAAGAGAGAGTTGAAATTCCATTTTCAGCTGTTGCTGCAACACCTGATATAAACTATGGATGTGGTCTGATTGCTCCACCAGCTAAGCAAATGTTTTCATTCTTAAAAGATTCAAATGTTCCTTTGGAGCAAAATCCTAAGCTTAAGCCTCATGCTATGTCTGTTTTTCTCATGACATGTGAATCAGCAGTTCAGCTGCGTAAGGCTGGTAAAGTCAGAGTGAGAGAATCAAATTTGAAGAAGTTAGGTGCCACTCATTTCAAAACTGGTGTGCAAGATGAACATTTTGAGGTAACAAAACAAGCTCTTTTGGAGACAATAGAAGAAGCAATACCTGAAATGTGGTCTCTAGCTATGAAAAATGCATGGGCAGAAGCTCATGATCAGCTTGCCAATGCCATCAAAGTTGAAATGAAAGAAGCTCATGATCAGATGGACAATGCCAATTTGATAATTAACATGGAAGAGAACACAGGCAGTTGTTTCACTGAGGAACAAGAAGCTCTAGTGGTGAAGTCATGGAATGCAATCAAGTACAACTCTGGAGATCTGAGTCTCAAGTTTTTCAAGAAAATCCTTGAGATTGCTCCACCAGCTAAGCAATTGTTCTCATTCTTAAAAGATTCAAATGTTCCATTGGAGCACAATCCTAAGCTCAAGCCTCATGCCATGTCTGTCTTTCTTATGACATGTGAATCAGCAGTTCAACTACGTAAGGCTGGTAAAGTCACTGTTAGAGAATCAAACTTGAAAAAGTTAGGTGCCACTCATTTCAAAACTGGTGTAAAAGATGAGCATTTTGAGGTAACAAAGCAAGCCCTTTTGGAGACAATAAAAGAAGCATTACCTGAAATGTGGTCACCAGCTATGGAAAATGCATGGGGAGAAGCCCATGATCAACTGGCCAATGCCATCAAAGCTGAAATGAAAAAAACTGATCATGATCATCAGACCAATCACGTAACCCTTACCCTTCAGAATATGGGCACTTTGGATACAAAAGGTTTCACTGAAGAACAAGAAGCTCTTGTGGTGAAGTCATGGAATGCAATGAAGAAGAATTCTGCTGAGTTAGGACTAAAGCTTTTCTTGAAAATATTTGAGATTGCTCCATCAGCTCAAAAACTGTTCTCATTCTTGAAAGATTCAAAAGTTCCTTTGGAGAAAAACACCAAGCTCAAGCCACATGCCATGTCTGTCTTTCTCATGACATGTGAATCAGCAGTTCAATTGCGAAAATCCGGTAAAGTTACGGTCAGAGAATCAAGCTTGAAAAAATTAGGTGCTAACCATTTTAAATATGGTGTAGTAGACGAGCATTTTGAGGTGACAAAGTTTGCACTTTTGGAGACCATAAAAGAAGCAGTACCTGAAATGTGGTCACCGGCTATGAAGAATGCATGGGGAGAAGCTTATGATCAGTTGGTCAATGCAATCAAATCTGAAATGAAACCTTCCTCTTAA 2358 0.3991 MIFSSNESMLFALSCTWKVTKTKTHSALESKKTMEEEGIGLVLARATELRLKINNCIQKPTSSPNGLLEDDEDEDATDRLLNICDALEALETQLSSLQVLQQQQRYEREIALAEIENSRKVLINKLKEYKGKDLEVIHEASTFASETVEPNNDLLLPPYPTRPPYSMSLDKQYLSQIPSVNKSGRNGLITLDNVIDAKKNPNEKEQNYVEDGAKNSRKGLRFFITSAAKAVVTVIGVVSILSMSGFGPNLLKTRWNVQRRHHRLENENGRSTSENKGDGQCPPGRVLVLENGEARCLVKERVEIPFSAVAATPDINYGCGLIAPPAKQMFSFLKDSNVPLEQNPKLKPHAMSVFLMTCESAVQLRKAGKVRVRESNLKKLGATHFKTGVQDEHFEVTKQALLETIEEAIPEMWSLAMKNAWAEAHDQLANAIKVEMKEAHDQMDNANLIINMEENTGSCFTEEQEALVVKSWNAIKYNSGDLSLKFFKKILEIAPPAKQLFSFLKDSNVPLEHNPKLKPHAMSVFLMTCESAVQLRKAGKVTVRESNLKKLGATHFKTGVKDEHFEVTKQALLETIKEALPEMWSPAMENAWGEAHDQLANAIKAEMKKTDHDHQTNHVTLTLQNMGTLDTKGFTEEQEALVVKSWNAMKKNSAELGLKLFLKIFEIAPSAQKLFSFLKDSKVPLEKNTKLKPHAMSVFLMTCESAVQLRKSGKVTVRESSLKKLGANHFKYGVVDEHFEVTKFALLETIKEAVPEMWSPAMKNAWGEAYDQLVNAIKSEMKPSS* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2046 785 PANTHER NON-SYMBIOTIC HEMOGLOBIN 322 442 - -
Mtr4g2046 785 PANTHER NON-SYMBIOTIC HEMOGLOBIN 624 783 - -
Mtr4g2046 785 PANTHER NON-SYMBIOTIC HEMOGLOBIN 451 613 - -
Mtr4g2046 785 SUPERFAMILY Globin-like 632 782 IPR009050 -
Mtr4g2046 785 CDD class1_nsHb-like 460 608 - -
Mtr4g2046 785 Gene3D Globins 459 606 IPR012292 GO:0019825|GO:0020037
Mtr4g2046 785 Gene3D Globins 633 780 IPR012292 GO:0019825|GO:0020037
Mtr4g2046 785 Gene3D Globins 321 434 IPR012292 GO:0019825|GO:0020037
Mtr4g2046 785 ProSiteProfiles Globin family profile. 460 608 IPR000971 GO:0020037
Mtr4g2046 785 ProSitePatterns Plant hemoglobins signature. 343 354 IPR019824 GO:0019825|GO:0020037
Mtr4g2046 785 ProSitePatterns Plant hemoglobins signature. 514 525 IPR019824 GO:0019825|GO:0020037
Mtr4g2046 785 PRINTS Plant globin signature 635 652 - -
Mtr4g2046 785 PRINTS Plant globin signature 660 680 - -
Mtr4g2046 785 PRINTS Plant globin signature 688 716 - -
Mtr4g2046 785 PRINTS Plant globin signature 753 779 - -
Mtr4g2046 785 SUPERFAMILY Globin-like 322 438 IPR009050 -
Mtr4g2046 785 Pfam Globin 485 603 IPR000971 GO:0020037
Mtr4g2046 785 Pfam Globin 324 432 IPR000971 GO:0020037
Mtr4g2046 785 Pfam Globin 659 777 IPR000971 GO:0020037
Mtr4g2046 785 Coils Coil 112 132 - -
Mtr4g2046 785 CDD class1_nsHb-like 634 782 - -
Mtr4g2046 785 MobiDBLite consensus disorder prediction 264 283 - -
Mtr4g2046 785 Coils Coil 436 456 - -
Mtr4g2046 785 SUPERFAMILY Globin-like 458 608 IPR009050 -
Mtr4g2046 785 ProSiteProfiles Globin family profile. 324 437 IPR000971 GO:0020037
Mtr4g2046 785 ProSiteProfiles Globin family profile. 634 782 IPR000971 GO:0020037
Mtr4g2046 785 PANTHER LEGHEMOGLOBIN-RELATED 624 783 IPR001032 GO:0019825|GO:0020037
Mtr4g2046 785 PANTHER LEGHEMOGLOBIN-RELATED 451 613 IPR001032 GO:0019825|GO:0020037
Mtr4g2046 785 PANTHER LEGHEMOGLOBIN-RELATED 322 442 IPR001032 GO:0019825|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2046 Mtr-Chr4 33988349 33997630 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2046 - - cam:101500782 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2046 4 33988349 33997630 Mtr4g2046 4 33988349 33997630 ECH