Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2042 ATGGTTAAGTTATATAGTTCAGAACCTTATAGAATAAGTTACATGAATGAAATACCTGGCTCTGTGGGCACAAGTGCCAGCTTCATTCTCAGATTAGGCCAGACTTTGTTTTCATCTGCTTCCCTTCTCTTTATGTCTTTGGGAGTTGAATTCTATAGCTACACAGCTTTCTGCTATTTGGTGACAATCATGGGTTTGGTTATACCTTGGAGTTTCACATTAGCATTGGTAGATGGATACTCAGTACTAGTCAAATGTCCCATTCGTCAACCAGGAATATTGTTGATTATTGTTGTTGGAGATTGGGTATTATCAACCCTGACACTAGCAGCAGCTGCCTCAACAGCTAGTGTTGTAGATCTCCTGCTAAATTCTCAAGGATCTTTTTGCCCTATAAAGCTTTGCTGCAGGTACAGGATATCTGCAGTTATGGCTTTTGTGTCATGGTTTCTGTCCTTGGCATCATCTCTTTTTAACCTTTACCTGCTACCTTCTTTGTGA 501 0.4012 MVKLYSSEPYRISYMNEIPGSVGTSASFILRLGQTLFSSASLLFMSLGVEFYSYTAFCYLVTIMGLVIPWSFTLALVDGYSVLVKCPIRQPGILLIIVVGDWVLSTLTLAAAASTASVVDLLLNSQGSFCPIKLCCRYRISAVMAFVSWFLSLASSLFNLYLLPSL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2042 166 Pfam Casparian strip membrane protein domain 23 151 IPR006702 -
Mtr4g2042 166 PANTHER CASP-LIKE PROTEIN 5B3 15 165 IPR045009 -
Mtr4g2042 166 PANTHER CASP-LIKE PROTEIN 5C3 15 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2042 Mtr-Chr4 33939226 33940766 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2042 - - gmx:100810360 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2042 4 33939226 33940766 Mtr4g2042 4 33939226 33940766 ECH