Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2020 ATGGTGTATATTTCGTTCTCACTATTACTTCCACTCTCGTTCCCTTTGAATCCCAAAAACCCAAAACGGTTTTCAGAATGTCCTTACAAATTCAATTTCAGGATTTCATTGACGATTCCCTCTTATTCCTCTCAGGAAAGAAGCATTGCACTGCCAGAATATGGGAAATACGAGAGCGTTGGGACAGTGAGCACAGAATCAATCACAAACAATCCCAATGAATGCAGCAATTCACCAGAGATTCGGCAGAGTGGCCTACCTCCTTTAGTCAGTGCATTGAAAGCCTCAGCTGAAGAAAATGCTGCTACTTTTCACTTTCCTGGACATAACAGAGGCCATGCTGCTCCTGCCTCGATGACTCGACTCATTGGAAGAAGACCATATGTTCATGATTTACCCGAGCTTCCTGAACTTGACAACCTCTTCTGTCCCCAAGGACCTATATTAGAAGCACAAACAGAAGCATCCAAACTTTTTGGTTCATCAGAGACATGGTTTCTTGTCGGAGGTACTACTTGTGGGATTCAGGCAGCAATAATGGCAACCTGTTCACCAGGAGAATTTCTTATTCTTCCTCGAAATTGTCATTTATCAGCTATATCTGCCATGGTATTATCCGGTGCAGTGCCTAAGTACATTGTTCCTGACTATAAAAATGACTGGGACATCGCTGGTGGTGTCACGCCATTACAGGTATTGAGTGCTATCCAGGAACTAGAATTGGAAGGAAAAAAAGCAGCAGCAGTTTTCATCACTTCACCTACTTATCATGGTATTTGCAGTAACTTGAGTGACATTTCCGAGTTGTGTCATTCCCGTAAAATTCCTCTGATTGTTGATGAAGCTCACGGTGCACATCTAGGATTTCATTCTGAACTGCCTAGCTCAGCCCTCCAGCAAGGGGCTGATCTAACTGTACAGTCTACTCACAAGGTTCTTTGCTCTCTTACTCAGTCATCTATGCTGCACATGTCAGGTGACATTGTAGATAAGGAAAAAATATCTAGGTGTCTCCAAACTCTCCAAAGCACAAGTCCTAGTTACCTTCTTTTGGCATCCCTAGATGCTGCCAGAGCTCAACTTAGTGAAAGCCCTGATACTGTATTCAACCAAGCGATTGAATTAGCAAATGAAGCAAAGTCCTCTCTTAAACGATTCCCTGGAATCTTAGTGCTTGAGAATTCTAGCTTTCTGACCATTCGTGCAATTGATCCATTGCGGCTTACTGTAGGTTTTTGGGAGCTTGGTTTATCAGGTTACGAAGCGGATGAAATCTTATATCGGGATTTTGGAATTGTTTGTGAACTCGTTGGGAATAAATCTATCACTTATGCACTTAATCTTGGAACCTGTAGGGACCATGTCCAAAGGCTTTTATCGGGAATAAAGCATCTAGCTGCAACATATCCTTCCATTCAGCAACCTAAAGACGAAGTACTTACTGAACACACACCCTTTGATGATATAATCACAAGCTTGACCCCCAGAGATGCATTTTTTGCAAGCAAAAGAAAAGTAACGATAAAGGAGAGCATTGGTAAGGTTTCGGGGGAGCTTATTTGTCCATATCCTCCAGGCATACCTGTATTGATTCCCGGTGAGGTTATTACTGAGAGAGCCGTCAATTATCTACTCCATGTAAGAAGCAAAGGTGCTGATATTAGTGGAGCATCTGATCCCTTACTTTCTTCTATAGTTGTCTGCAATGTACATAAAAAACAGCTGGTCTCATAA 1734 0.4227 MVYISFSLLLPLSFPLNPKNPKRFSECPYKFNFRISLTIPSYSSQERSIALPEYGKYESVGTVSTESITNNPNECSNSPEIRQSGLPPLVSALKASAEENAATFHFPGHNRGHAAPASMTRLIGRRPYVHDLPELPELDNLFCPQGPILEAQTEASKLFGSSETWFLVGGTTCGIQAAIMATCSPGEFLILPRNCHLSAISAMVLSGAVPKYIVPDYKNDWDIAGGVTPLQVLSAIQELELEGKKAAAVFITSPTYHGICSNLSDISELCHSRKIPLIVDEAHGAHLGFHSELPSSALQQGADLTVQSTHKVLCSLTQSSMLHMSGDIVDKEKISRCLQTLQSTSPSYLLLASLDAARAQLSESPDTVFNQAIELANEAKSSLKRFPGILVLENSSFLTIRAIDPLRLTVGFWELGLSGYEADEILYRDFGIVCELVGNKSITYALNLGTCRDHVQRLLSGIKHLAATYPSIQQPKDEVLTEHTPFDDIITSLTPRDAFFASKRKVTIKESIGKVSGELICPYPPGIPVLIPGEVITERAVNYLLHVRSKGADISGASDPLLSSIVVCNVHKKQLVS* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2020 577 Pfam Orn/Lys/Arg decarboxylase, major domain 87 398 IPR000310 GO:0003824
Mtr4g2020 577 SUPERFAMILY PLP-dependent transferases 87 467 IPR015424 -
Mtr4g2020 577 Gene3D - 87 367 IPR015421 GO:0003824
Mtr4g2020 577 Pfam Orn/Lys/Arg decarboxylase, C-terminal domain 504 550 IPR008286 GO:0003824
Mtr4g2020 577 PANTHER ARGININE DECARBOXYLASE 64 569 - -
Mtr4g2020 577 PANTHER ARGININE DECARBOXYLASE 64 569 - -
Mtr4g2020 577 SUPERFAMILY Ornithine decarboxylase C-terminal domain 425 569 IPR036633 GO:0003824
Mtr4g2020 577 Gene3D - 471 573 - -
Mtr4g2020 577 CDD Orn_deC_like 88 380 IPR000310 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2020 Mtr-Chr4 33726534 33729498 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2020 - - mtr:MTR_4g068240 900.582