Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2015 ATGGCTGTCAACGATGCTGATCAATCTCACAAAGCTCACAGAACTCGTCAAGCTGGTCCAAAGAAGAAAACCAAATCCAGGAAGAAGCAAGATGGCGATGGTGATGATGGTCAGATTATGCAAAACCCTAAAGCTTTTGCTTATTCTTCATCTAAAAAAGTTAAGAAATTGCAATCACGCGCCGTCGAGAAAGAACAGCGCCGTCTTCATCTTCCCATCATTGATCGTTCTTATGGTGAACCGCCTCCTTTCGTTATCGTTGTTCAGGGTCCTCCCCAGGTTGGAAAGTCGCTTTTGATTAAGTCTTTGATTAAGCATTACACTAAGCAGAACTTGCCTGAAGTTCGTGGTCCAATTACAATTGTATCAGGAAAGCAAAGGCGATTGCAGTTTGTGGAATGCCCGAATGATATCAATGGCATGATAGATGCAGCCAAGTATGCTGATCTAGCACTTCTTCTTATAGACGGAAGTTATGGTTTTGAAATGGAAACATTTGAATTTCTTAATATTTTGCAAGTTCATGGGTTCCCAAAGGTCATGGGGGTCCTTACCCATCTTGATGGATTCAAGGATGTTAAAAAGTTGAGGAAAACGAAACAACGACTCAAACACCGGTTTTGGACCGAAATATACGATGGAGCTAAATTGTTTTACTTATCAGGCCTTATTCATGGAAAGTATGTCAAACGTGAAGTTCACAATCTTGCTCGATTCATATCAGTCATGAAGTTTCATCCTCTATCTTGGCGAACTTCCCATCCCTATGTTCTGGTGGATCGTTTTGAAGATATCACTCCTCCTGAACAAGTGCATGCAAATAATAAATGTGACAGAAAAGTCACACTTTATGGCTATCTCAGAGGTTGTAATTTGAAAAAAGGCAATAAGGTGCACATAGCTGGAGTGGGTGATTATGGTTTAGCTCATGTAACTGGTTTACCTGATCCATGCCCTCTTCCTTCTGCTGCCAAAAAGAAAGGACTGCGCGATAAAGAAAAGTTATTTTATGCTCCCATGTCTGGGGTTGGGGATCTTTTGTACGACAAAGATGCGGTGTACATAAATATTAATGATCACTTCGTTCAATTCTCAAAAGTTGATGATGAAAACTTTGCCATGACGAGTAAAGGAAAGGAAAGGGATGTAGGGGTGGATTTAGTGAAATCACTTCAGAATACCAAATACTCGATCAATGAAAAGCTAGAGAATAGCTTTATAAATCTTTTTGATCAAAAGGGGAAAGTGTCATCAGAAGCTCTAGGTGGCGCACAAGGTACAAACGAGGATGTAGAGGAGGATGGAAAAGTAGAAACTTCAGATAATAATGAAATCGATTCGGATGCTTCAGAGTCATCTGACCGAGATGAAGCTGATGCCATTACAAATGATGATGGAAACCACTTAAAAGAAAAGATTGAGTTTCACAATGGAAGACAAAGGAGAAAGGCAATCTTTGGAAATGACATTGATCAAAGTGATCAGATGGATGAAGATGACACACATGAAGATGACATGGGAAATATTTCAAAGTGGAAGGAGTCGTTGGCGGAAAGAATCCTTGCACGGAAATCTCCTAGTTTGATGCAACTTGTGTATGGGGAATCTACTAATAATTCGACCTCTATGGACGAAGAGAATGATAGTAGTGAGGATGAAGAAAATGGTGATTTCTTTATACCTAAAGAAGAAATAAAAAAGCAATATACGAGAGATGGACTGGATGATGGAATGGTCCACACCGAGGATTGTTCCAAGTGTGCCAAACTTATGAGCCAGAAATGGGATGAGAAAGATCATGGAGAGATTCGCAACCGTTTTGTGTCTGGAAATTTGGCAAAAGCTGCACGCAGAAATGCACTTCAAAAAGCTAATACTGAAGAGGAAGAGGAAGATGAAGATGAAGATGTCTATGGTGACTTTGAAGATTTAGAAACAGGAGAAAACCATGAGAATTATAAGACAGATGATGCTTTTGCGATAACAACACAGAAGGGAGTTGATAGAGAAGCTGAGGAGCGGAGGCTCAAGAAACTTGCTCTTCATGCAAAATTTGTTTCTAGATATGATGATGACCCCGAGACACCAGAGGAAGATACTGGCAATGAAAATGAAGCTAAGTTCCATCGTGAACAACCCAATGAAAGTAACTATATTGACAAGTTAAAGGAGGAGATTGAGCTACGAAAACAAATGAATATTGCTGAACTGAACGATCTTGATGAGGATACCAGATTAGAGGTAGAAGGCTTCCGAACAGGGACATACCTAAGATTGGAGGTTCATGATGTTCCCTGTGAAATGGTTGAGCACTTTGATCCCTACCATCCAATATTGGTTGGGGGTGTTGGTCTAGGGGAGGAAAATGTTGGATACATGCAGGCAAGGTTAAAGCGGCATAGGTGGCACAAGAAAGTCCTGAAGACCAGAGACCCAATTATTGTTTCTGTTGGATGGAGGCGTTACCAGACAACACCAGTTTATGCTATTGAGGATCTCAATGGAAGGCATCGTATGCTAAAATACACACCAGAACACATGCATTGCCTTGCTATGTTTTGGGGCCCTCTTGCACCTCCCAACACTGGAATAGTTGCTGTTCAGACTTTATCCAACAATCAGGCAACTTTTAGGATTACCGCAACTGCTGTTGTTGTTGAGTTTAATCACGCTGCAAGGATAGTGAAGAAAATCAAATTGGTTGGTTATCCGTGCAAGATATTCAAGAAAACAGCACTTATCAAGGATATGTTTACTTCTGATCTTGAAGTAGCTCGGTTTGAAGGTGCGGCTATTCGAACAGTTAGTGGGATTAGGGGGCAAGTCAAGAAGGTTGCAAAAGAAGAGATAGGTAACCAGCCAAAAAGGAAGGGTGGGCAAATCAAAGAAGGAATTGCTAGGTGCACTTTTGAAGACAAAATTCTGATGAGTGACATTGTTTTCCTGCGAGCCTGGACTCAAGTTGAAGTTCCTCAGTTTTATAATCCGTTGACAACAGCATTGCAGCCTAGGGACCAGACCTGGAAAGGAATGAGAACTGTTGCAGAATTGAGAAGAGAACACAATCTTCCTATACCTGTAAACAAAGATTCTCTTTACAAGAAAATTGAAAGGAAACCTAGAAAGTTCAATCCATTGGTGATTCCCAAGTCACTACAGGCAAATCTTCCCTTTGAATCAAAACCTAAGCATACGCCCAAGCGAAAAAGGCTGTCTTTTGATGATAGAAGGCAAAAGGGTGTTGTTGTTGAACCTCGTGAGCGTAAAATCCACGCTCTTGTTCAACACCTTCAGTTAATGAAAACTGAGAAGATAAAAAAGCGGAAGCATAAGGAAGGGGAGAAGAGAAAAGTACTTGAAGCAGAGAGAGCAAAAGAGGAGCTGGTGTCGAAAAAGCGCCGGAGAGAAGAAAGACGAGACAAATACCGGACACAAGACAAGCTCAATAAAAAAATTCGTAGAGCATAG 3468 0.4095 MAVNDADQSHKAHRTRQAGPKKKTKSRKKQDGDGDDGQIMQNPKAFAYSSSKKVKKLQSRAVEKEQRRLHLPIIDRSYGEPPPFVIVVQGPPQVGKSLLIKSLIKHYTKQNLPEVRGPITIVSGKQRRLQFVECPNDINGMIDAAKYADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDGFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPPEQVHANNKCDRKVTLYGYLRGCNLKKGNKVHIAGVGDYGLAHVTGLPDPCPLPSAAKKKGLRDKEKLFYAPMSGVGDLLYDKDAVYININDHFVQFSKVDDENFAMTSKGKERDVGVDLVKSLQNTKYSINEKLENSFINLFDQKGKVSSEALGGAQGTNEDVEEDGKVETSDNNEIDSDASESSDRDEADAITNDDGNHLKEKIEFHNGRQRRKAIFGNDIDQSDQMDEDDTHEDDMGNISKWKESLAERILARKSPSLMQLVYGESTNNSTSMDEENDSSEDEENGDFFIPKEEIKKQYTRDGLDDGMVHTEDCSKCAKLMSQKWDEKDHGEIRNRFVSGNLAKAARRNALQKANTEEEEEDEDEDVYGDFEDLETGENHENYKTDDAFAITTQKGVDREAEERRLKKLALHAKFVSRYDDDPETPEEDTGNENEAKFHREQPNESNYIDKLKEEIELRKQMNIAELNDLDEDTRLEVEGFRTGTYLRLEVHDVPCEMVEHFDPYHPILVGGVGLGEENVGYMQARLKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDLNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQTLSNNQATFRITATAVVVEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKVAKEEIGNQPKRKGGQIKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPRDQTWKGMRTVAELRREHNLPIPVNKDSLYKKIERKPRKFNPLVIPKSLQANLPFESKPKHTPKRKRLSFDDRRQKGVVVEPRERKIHALVQHLQLMKTEKIKKRKHKEGEKRKVLEAERAKEELVSKKRRREERRDKYRTQDKLNKKIRRA* 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2015 1155 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 667 989 IPR007034 -
Mtr4g2015 1155 MobiDBLite consensus disorder prediction 1114 1147 - -
Mtr4g2015 1155 Pfam AARP2CN (NUC121) domain 232 317 IPR012948 GO:0005634|GO:0042254
Mtr4g2015 1155 MobiDBLite consensus disorder prediction 534 575 - -
Mtr4g2015 1155 MobiDBLite consensus disorder prediction 454 488 - -
Mtr4g2015 1155 CDD BMS1 45 274 IPR037875 GO:0005525
Mtr4g2015 1155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 220 IPR027417 -
Mtr4g2015 1155 MobiDBLite consensus disorder prediction 700 716 - -
Mtr4g2015 1155 PANTHER RIBOSOME BIOGENESIS PROTEIN 1 500 IPR039761 GO:0042254
Mtr4g2015 1155 PANTHER RIBOSOME BIOGENESIS PROTEIN 506 1148 IPR039761 GO:0042254
Mtr4g2015 1155 MobiDBLite consensus disorder prediction 1 45 - -
Mtr4g2015 1155 MobiDBLite consensus disorder prediction 555 575 - -
Mtr4g2015 1155 MobiDBLite consensus disorder prediction 419 506 - -
Mtr4g2015 1155 Gene3D - 84 246 IPR027417 -
Mtr4g2015 1155 SMART DUF663_2 660 988 IPR007034 -
Mtr4g2015 1155 Coils Coil 1111 1145 - -
Mtr4g2015 1155 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 81 246 IPR030387 -
Mtr4g2015 1155 MobiDBLite consensus disorder prediction 429 443 - -
Mtr4g2015 1155 SMART aarp2cn2 232 318 IPR012948 GO:0005634|GO:0042254
Mtr4g2015 1155 MobiDBLite consensus disorder prediction 1054 1076 - -
Mtr4g2015 1155 MobiDBLite consensus disorder prediction 687 716 - -
Mtr4g2015 1155 MobiDBLite consensus disorder prediction 1104 1155 - -
Mtr4g2015 1155 PANTHER BNAC08G44910D PROTEIN 506 1148 - -
Mtr4g2015 1155 PANTHER BNAC08G44910D PROTEIN 1 500 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2015 K14569 - gmx:100792176 1790.78