Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2006 ATGGCTGTTAACGCCGATCGCTTCCAAGATTCAAACCCTAAAACTTGCGTTGTTTTAGGCGGAAGAGGATTCATCGGGAAATCATTAGTCTTACAGCTCTTGAAACTCGGAAACTGGATCGTCCGAATCGCCGATTCCACTCACTCTCTCAACCTTCACCACTCCGAATCTCTCCTCGCTGAAGCTCTCTCTTCTTCCCGCGCTTCTTACTTCCATCTCGACCTCACCGATAAACACCGCATCGCCAAAGTTCTAGAAGGTTCTTCCGTCGTTTTCTATTTTGATGTTGATAGTTCCAATAATGGCGACCATTTCTGCAGTTTGTATAAGCTAATAGTTCAAGGTGCGAAGAATGTGATTATTGCTTGCAGAGAATCTAAAGTGAAACGCTTAATATACAATAGTTCTGCTGATGTTGTGTTTGATAGAGATAAACCGTTGGCGTATCCGTGGAAAGTTGATAACATGTTAATTGACCTTAAGGCTCAAGCAGAAGCTTTGATTTTGAATGCTAATGACATTGATGGAGTGCTGACATGTTCGCTTCGTTCTAGTAATGTGTTTGGTCCTGGTGACTCAGAACTTGTGCCATTTTTTCTGAAGTTAGCAAGATATGGTTTCACAAAGTTTATTATAGGGACTGGTGATAATTTGACCGACTTCACCTTTTCTGAGAATGTTGCTCATGCCCATATCTGTGCAGAAGAAGCCTTAAATTTCCAAACGGTTTCTGTGGCTGGAAAGGCATTTTTTATCACAAATCTCGAGCCTATGAAGTTCTGGAAATTTCTCTCACTTTTATTGGAAGGCCTTGGATATCGAAGGCCATTCATCAAGCTTCCTGCCAATTTAGTGCAATACGTTCTCTCAGTTTTAAAGTGGTTATATGAAAAATCGGGACCCGGATACTTCAACTATCCCTTATTAGTTCATTTTATTCAGTTAGCTTTACACACCCGAACTTTCAACTGCTCAGCAGCTCAAAAATATATTGCATACGCACCGATAGTCTCCCTTGAGGAAGGTGTCACATTAACCATAGAGTCATTCTCCCATTTAGCTAAAGATTCATCTTTCTCAAGATGCTGTGATCGGTCAAAAGCAGATAAGCTGCTTGGTAGTGGAAAAGTGGCTGACATTTTGTTGTGGAGAAACGAGAAGGCATCCTTCACATGTTTCCTTGGGCTAGTTTTTTTGTTCTATTGGTTTTTCCTTTCTGGAAGCACTTTTATATCATCTGCTGCAAGGCTTTTACTGTTTGCGACTTTACTTCTATGTGGACATGGTTTTCTGCCATCAAAGCTATTTGGTTTCTCTATACAGAGAGTGCCTGGGTCTAATTTTAAGATCTCTGATACGGCTGTGAAAGATTCAGTTACAATTACATTACATCTATGGAACAAGGGGTTTCAAAATATTAAGGGACTGGCCCAAGGGGATGATTGGTCTATATTTTTCAAGGTTGCGGGTTTTCTCTACCTTCTGAAGTTGTTTCTATCAAAGTTGTTGACAACATTGATAGGTGTAGGTCTGGTCTTCGCATTTATGGTATTCTTTGTTTACGAGCAATATGAATCAGAAATTGATGGACTTGTGGATATTCTAATTACTATTTCGAAGGAGTTCATGGTATATTTGATGAGAAACTTACCTGTTTCTGTATCGCGGCTTCTGCATTATGGTGACAACTTTCAGCATTACCAAGGACCAGAATGCGGGAAAGATCTGAGATAG 1734 0.4031 MAVNADRFQDSNPKTCVVLGGRGFIGKSLVLQLLKLGNWIVRIADSTHSLNLHHSESLLAEALSSSRASYFHLDLTDKHRIAKVLEGSSVVFYFDVDSSNNGDHFCSLYKLIVQGAKNVIIACRESKVKRLIYNSSADVVFDRDKPLAYPWKVDNMLIDLKAQAEALILNANDIDGVLTCSLRSSNVFGPGDSELVPFFLKLARYGFTKFIIGTGDNLTDFTFSENVAHAHICAEEALNFQTVSVAGKAFFITNLEPMKFWKFLSLLLEGLGYRRPFIKLPANLVQYVLSVLKWLYEKSGPGYFNYPLLVHFIQLALHTRTFNCSAAQKYIAYAPIVSLEEGVTLTIESFSHLAKDSSFSRCCDRSKADKLLGSGKVADILLWRNEKASFTCFLGLVFLFYWFFLSGSTFISSAARLLLFATLLLCGHGFLPSKLFGFSIQRVPGSNFKISDTAVKDSVTITLHLWNKGFQNIKGLAQGDDWSIFFKVAGFLYLLKLFLSKLLTTLIGVGLVFAFMVFFVYEQYESEIDGLVDILITISKEFMVYLMRNLPVSVSRLLHYGDNFQHYQGPECGKDLR* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2006 577 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 480 - -
Mtr4g2006 577 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 3 12 480 - -
Mtr4g2006 577 ProSiteProfiles Reticulon domain profile. 377 551 IPR003388 -
Mtr4g2006 577 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 17 281 IPR002225 GO:0003854|GO:0006694|GO:0016616
Mtr4g2006 577 Pfam Reticulon 377 533 IPR003388 -
Mtr4g2006 577 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 352 IPR036291 -
Mtr4g2006 577 Gene3D - 4 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2006 Mtr-Chr4 33603678 33610936 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2006 15 357 Lipid Metabolism Gene Families AT2G33630 26.471 2.20e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2006 K23558 - gmx:100794808 846.269