Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2004 ATGGATTTGGAATCAGTTGGAGATTTAGCGATTCATGAAATTATGGAAAATCTTAAACCCGAAGACATTGCCAGAATTTCATGTGTCAGTAACAGGTTCAAATCTTTCACCTCCGATGACTCTCTTTGGTCCAAAATCTGCTTCCGTGAACTCTCTCTCACTCAACCCATTGATCATCTCGGAAACCCGACCCCTTCCTTCAAGGAAGCTTATCAAACTTGGAGAGAAGCTTTTGTGATGTATCCTTGGTCTCTTGTTAAGCGTGTAAAAAGGTGTTGGGACAATATAAAAACCTGGCTCACCAATAACTTTCCAGAAGCTAAGGAAACTCTTTGTGAAGGTGCGTCAGAAGTTGAGATTCAAGAGTTGGAGGATGTCTTAAATGTCAAATTGCCTCTTCCTACAAGGATCCTTTACCGCTTTCATAATGGGCAAGAAATTGAAAAACATGACCATGATACCAGCACATCTGACATTTCTTTGGGAATTATTGGTGGTTACTCCTTCTATGATCATTTCGTGAATGTTTATTTATTACCTATAAGTCAGGTAATCCAAGAAACTCAGCAAATTTCGCACAACTTAGGATTTTTAAGAAGATCCAAGTATGTTCTTGTGGCTGCTTCGTCCACGTACCGTGAGAAGTTGTTCTTTCTCAACTGTACCAATGGTCAACTATATGTTGGGACCAGAAATCTTCTTACCAATAGAGACTTGATGCCATGTGTTCCTCAGAATCTGATTAGTTTGCATCATGAGATGGACAGCGAAAAGATTCAGGATGCCATGCTACTGTGGTTAGAAGAACATGGTCGCCGTTTACAACGTGGTTTTATCAAATTGCTCGAAGAAGGAAATGCCAAAAGCATTAGTCTTTTTCCAGAAGAATCCCCTGTTTGTTCAACTGCTGTAACCAATGGTGTGCAGATTCGCGCCTCTGCATTGCTTGTCCCTGAGGGTGTTGATCTTCAAGGTGACCGTGAGAAGTACTTATTTTCTTATTCAATCCGCATGTCCTTACAACCTCAAGGATGTGTGATCAATGGAATGTCCCACAGTTCTTGCCAGCTTTATTGGAGGCACTGGATCATCCGTGCTAATGATGCTGTAGTATCTGACGTCAATGGAGAAGCTGTTATAGGAATGTACCCACTTTTGCGTCCAGGTGACAAAGAATTTGTTTATCAGAGTTGCTCACCTCTGCCAACATCCTCAGGTTCCATTGAAGGTTCCTTTACCTTTGTACCTGGAAGATTGGTAGACCCAAGAGGGGATCCATTCCTAGTTCAAGTCGCACATTTCCCTCTTCAGCTGCCAGACTATATTTTCTGA 1332 0.4174 MDLESVGDLAIHEIMENLKPEDIARISCVSNRFKSFTSDDSLWSKICFRELSLTQPIDHLGNPTPSFKEAYQTWREAFVMYPWSLVKRVKRCWDNIKTWLTNNFPEAKETLCEGASEVEIQELEDVLNVKLPLPTRILYRFHNGQEIEKHDHDTSTSDISLGIIGGYSFYDHFVNVYLLPISQVIQETQQISHNLGFLRRSKYVLVAASSTYREKLFFLNCTNGQLYVGTRNLLTNRDLMPCVPQNLISLHHEMDSEKIQDAMLLWLEEHGRRLQRGFIKLLEEGNAKSISLFPEESPVCSTAVTNGVQIRASALLVPEGVDLQGDREKYLFSYSIRMSLQPQGCVINGMSHSSCQLYWRHWIIRANDAVVSDVNGEAVIGMYPLLRPGDKEFVYQSCSPLPTSSGSIEGSFTFVPGRLVDPRGDPFLVQVAHFPLQLPDYIF* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2004 443 ProSiteProfiles ApaG domain profile. 302 443 IPR007474 -
Mtr4g2004 443 Pfam ApaG domain 325 415 IPR007474 -
Mtr4g2004 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Mtr4g2004 443 Gene3D - 93 232 IPR037883 -
Mtr4g2004 443 Gene3D - 5 92 - -
Mtr4g2004 443 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Mtr4g2004 443 SUPERFAMILY ApaG-like 304 443 IPR036767 -
Mtr4g2004 443 Pfam F-box domain 10 45 IPR001810 GO:0005515
Mtr4g2004 443 SUPERFAMILY SMI1/KNR4-like 92 170 IPR037883 -
Mtr4g2004 443 Gene3D ApaG domain 300 442 IPR036767 -
Mtr4g2004 443 PANTHER F-BOX PROTEIN SKIP16 1 443 - -
Mtr4g2004 443 SUPERFAMILY F-box domain 11 78 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2004 K10290 - gmx:100809876 694.501