Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2002 ATGGGTAAGCCTTTGATTTATGAGATCTTGGAAAAACCAGCAACAAGTGTTATTATAGCAATTTGCAGTGCAATTTGGTTTTATATACAGAAGAAAAATATTGGTTATTCACATGTTGGTTTGAGTTATGAGACTGCAATGGAAGGACAATATTGGAGAATAATCACTTCTGCATTTTCTCATATAAGTATAATTCATCTTGTTTTTAACATGAGTGCACTTTGGAGTCTTGGGGCTGTAGAGCAATTGGATCATGTTGGCCTCGGTGTCGAGTATTATTTGCAGTATACACTTGTGTTGGTGGTTGTATCGGGGGTTTTGGTTTTGGCAATGTATCACTTGTTGATTCAGAGATTCAAGGTTGAGTATTTTCGTCGAGTTACGGCTGTTGGTTATTCGTGTGTTGTTTTCGGGTGGATGACGATTCTTTCTGTGAAGCAACCTTCTTCAAAGTTGGAGCTCTTTGGATTTCTTTCGCTTCCTATTAGTTTTGCTCCGTTTGAATCACTTATTTTCACTTCGATTATTGTTCCTCAGGCGAGTTTTATTGGCCATTTATCTGGGATTGTTGTTGGATATGCTATAGCTTGGGGTTTGATTCATGGGATGACTAATTACTGGGCACTTACCTTATTGGGTTGGATTGTTCTTGTCTTTGTTTTGAGTTTGAAGAAATCTAGTGCACTTGACATAAGCTTCATTGAGATTGAATCTGTTACCGATCCTTCATTACCGTCTGTGCGATTTTTGGGATCTGGCAATGGTAGAACCCTGCAGATGAGTGCATTGCCAGATGGAAATGTTGACATTGTCTAA 816 0.386 MGKPLIYEILEKPATSVIIAICSAIWFYIQKKNIGYSHVGLSYETAMEGQYWRIITSAFSHISIIHLVFNMSALWSLGAVEQLDHVGLGVEYYLQYTLVLVVVSGVLVLAMYHLLIQRFKVEYFRRVTAVGYSCVVFGWMTILSVKQPSSKLELFGFLSLPISFAPFESLIFTSIIVPQASFIGHLSGIVVGYAIAWGLIHGMTNYWALTLLGWIVLVFVLSLKKSSALDISFIEIESVTDPSLPSVRFLGSGNGRTLQMSALPDGNVDIV* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2002 271 PANTHER RHOMBOID PROTEASE 1 271 - -
Mtr4g2002 271 Pfam Rhomboid family 48 201 IPR022764 GO:0004252|GO:0016021
Mtr4g2002 271 Gene3D - 10 199 IPR035952 -
Mtr4g2002 271 PANTHER RHOMBOID-LIKE PROTEIN 13 1 271 - -
Mtr4g2002 271 SUPERFAMILY Rhomboid-like 13 199 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2002 Mtr-Chr4 33567890 33569453 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2002 - - gmx:100818954 479.174