Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2000 ATGGCCTCCAACGCTTCCCTCCTCCCCGCCACCGGCTCCGGTCTCATCGTCAGCTTTGGCGAGATGCTCATTGACTTCGTTCCAACCGCTTCCGGCGTCTCCCTTGCAGAAGCACCTGGCTTTCTCAAAGCTCCCGGTGGCGCACCCGCTAACGTTGCGATCGCTGTTTCACGACTCGGTGGTAAATCAGCCTTCGTCGGAAAACTCGGTGATGATGAATTCGGTCACATGCTCGCCGGGATCTTGAAAGAAAACAACGTGAGAGGGGATGGTATCAACTTTGACAAAGGCGCTCGTACTGCACTCGCGTTTGTTACTCTACGCGCCGATGGAGAGCGTGAGTTCATGTTTTACAGAAATCCGAGTGCTGACATGCTTCTTACTCCTGAAGATCTCAATCTTGAACTCATCAGATCTGCAAAAGTATTCCATTATGGATCGATAAGTTTGATTGTGGAGCCATGCAGATCAGCACATCTGAAGGCAATGGAAGTTGCCAAGGATGCTGGGTGCCTTCTCTCTTATGATCCAAACCTTAGGTTACCTTTGTGGCCTTCACCAGAGGAAGCCCGTAAGCAAATTCTGAGTATATGGGACAAGGCTGATCTCATCAAGGTCAGTGATGTGGAGCTGGAATTTTTAACTGGAAGTGATAAAATTGATGATGCTTCTGCTCTCTCCCTGTGGCACCCCAATTTGAAGTTACTTCTTGTAACTCTTGGTGAAAATGGTTCCAGATATTATACCAAGAATTTCAAAGGATCAGTAGATGCTTTCCATGTCAACACTGTTGATACAACTGGTGCTGGTGATTCCTTCGTTGGAGCTCTGTTGGGCAAGATTGTAGATGATCAATCTATACTTGAAGATGAAGCAAGGTTAAGGGAAGTACTTAAGTTTGCAAATGCATGTGGAGCAATTACTACTACCAAAAAGGGAGCAATTCCAGCTCTTCCAACAGAAGCTGATGTCCTTAGCCTGATCAATAAGGCATAG 996 0.4689 MASNASLLPATGSGLIVSFGEMLIDFVPTASGVSLAEAPGFLKAPGGAPANVAIAVSRLGGKSAFVGKLGDDEFGHMLAGILKENNVRGDGINFDKGARTALAFVTLRADGEREFMFYRNPSADMLLTPEDLNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKDAGCLLSYDPNLRLPLWPSPEEARKQILSIWDKADLIKVSDVELEFLTGSDKIDDASALSLWHPNLKLLLVTLGENGSRYYTKNFKGSVDAFHVNTVDTTGAGDSFVGALLGKIVDDQSILEDEARLREVLKFANACGAITTTKKGAIPALPTEADVLSLINKA* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2000 331 PANTHER BNAA04G18320D PROTEIN 20 327 - -
Mtr4g2000 331 PRINTS Ribokinase signature 41 60 IPR002139 GO:0016301
Mtr4g2000 331 PRINTS Ribokinase signature 236 247 IPR002139 GO:0016301
Mtr4g2000 331 PANTHER HEXOKINASE FAMILY MEMBER 20 327 - -
Mtr4g2000 331 CDD bac_FRK 15 315 - -
Mtr4g2000 331 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 46 70 IPR002173 GO:0016773
Mtr4g2000 331 Pfam pfkB family carbohydrate kinase 15 320 IPR011611 -
Mtr4g2000 331 SUPERFAMILY Ribokinase-like 16 327 IPR029056 -
Mtr4g2000 331 Gene3D - 14 331 IPR029056 -
Mtr4g2000 331 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 265 278 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2000 Mtr-Chr4 33551228 33554349 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2000 K00847 - gmx:100780082 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3436 2 48481954 48485261 Mtr4g2000 4 33551228 33554349 PCT