Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1999 ATGGCAACTACGTTGTTCCGCACTATTCGTAGAGCTTCCACTGTATTCAAATCCTCGTATGCTGCTACCTCGTTTTTGGTCCCTCCCAGGTTAGTTGGGAGGGGTCAAATATATTCTTTTGATTGTTCATTGAGGCATTGTGTGCCTTTTGAGAAGAAATGTTTTTGGTGGGGTTTGAGAGAGATGAGTTATGGGAAGGTTAATCTTGTGATAAAGGATGGGAAGACAAAGTTCGAGACTCATGAGGTTGAGGCTCCAAGGAAAGATAAGTGGAAGACTAAGAAGAGGTTGAAGATGCAGAGGAAAAGAGAGAAGGAGAAGAGGAAAGCGGCGAATAGGAGAGATCCACGTCGACTTGGTGTTAAAGGGAAGAAGAAAAAGCAGAAGTTTGCTAATCCTGAAGAGAGGATTAAGTTCAAGATTAACAATGCCAGAGTCAAAGAAGCGTTGCTTATTGAACGGCTCAAACGATATGAAGTTGCTAAGGCTCAGGGTCCGGAGGTAAAACCAGACGGTTTGACAGGGGAGGAACGACATTATCTGAAGAAAATGGCTCAGAAGAGTTCTAATTATCTACAAGTTGGCAGAAGAGGATTATTTGGAGGGGTTATTCTCAATATGCATATGCATTGGAAGAAACATGAGACTGTTAAGTGCATATGCAAGCCTTGTAAACCTGGTCAAGTACACGAGTATGCGCAAGAACTTGCCAGATTGAGTGGCGGTATTCCAATTCACATCATAGGCGATGACACTATAATATTTTATCGTGGAAAGAATTACATGCAACCTGAGGTTATGTCGCCGATAGATACATTGTCGAAGAAAAAGGCACTTGAAAAATCCAAGTATGAGCAATCGCTCGAGTCAGTGAGGCGTTTCATTGCTATCGCGGAGAAAGAATTGGAGCTATATCATAGACACGTTGCACTTTATGGCGACCCTAGCAACCGCAATCCTTTGTCTATACTCGACGGTCCAATTGGAAGCTCCATGGAAAAGAGGAATCATGATAAAAAGAACCTTGATTCAAGTAGCTATTATCTTTCAGAGACAGAATCAGATTCCTCACAGACGGAGCTATCAGAATCTGAAGATAACTTTGAAAATGGGAACTTGTCAATGAGTGAATCAGATTCTGAAGATAGCATGTTAGGTTCGGATGATGATCAAGAAAGAGAAGTATATTTAACTAAAATGCAAGATGAAAGTGTATGCTCAACCACAGGTCCATCATCAATGTCTAAGCATACCCACCATTTTATGAATCAACATTTGTTATCTTAA 1287 0.411 MATTLFRTIRRASTVFKSSYAATSFLVPPRLVGRGQIYSFDCSLRHCVPFEKKCFWWGLREMSYGKVNLVIKDGKTKFETHEVEAPRKDKWKTKKRLKMQRKREKEKRKAANRRDPRRLGVKGKKKKQKFANPEERIKFKINNARVKEALLIERLKRYEVAKAQGPEVKPDGLTGEERHYLKKMAQKSSNYLQVGRRGLFGGVILNMHMHWKKHETVKCICKPCKPGQVHEYAQELARLSGGIPIHIIGDDTIIFYRGKNYMQPEVMSPIDTLSKKKALEKSKYEQSLESVRRFIAIAEKELELYHRHVALYGDPSNRNPLSILDGPIGSSMEKRNHDKKNLDSSSYYLSETESDSSQTELSESEDNFENGNLSMSESDSEDSMLGSDDDQEREVYLTKMQDESVCSTTGPSSMSKHTHHFMNQHLLS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1999 428 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 390 - -
Mtr4g1999 428 SUPERFAMILY YhbY-like 173 267 IPR035920 -
Mtr4g1999 428 Pfam CRS1 / YhbY (CRM) domain 173 257 IPR001890 GO:0003723
Mtr4g1999 428 MobiDBLite consensus disorder prediction 320 428 - -
Mtr4g1999 428 ProSiteProfiles CRM domain profile. 171 268 IPR001890 GO:0003723
Mtr4g1999 428 Gene3D - 173 271 IPR035920 -
Mtr4g1999 428 SMART CRS1_YhbY_2 173 257 IPR001890 GO:0003723
Mtr4g1999 428 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 1 390 IPR040286 -
Mtr4g1999 428 MobiDBLite consensus disorder prediction 345 381 - -
Mtr4g1999 428 Coils Coil 94 114 - -
Mtr4g1999 428 MobiDBLite consensus disorder prediction 91 108 - -
Mtr4g1999 428 MobiDBLite consensus disorder prediction 401 428 - -
Mtr4g1999 428 MobiDBLite consensus disorder prediction 82 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1999 Mtr-Chr4 33543809 33547049 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1999 - - gmx:100796393 561.222