Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1975 ATGGCATTCAATAACCTTCTCTTCCTCATTGCTTTTGTTCTTTTTCTTAGCAAATCAAATATTGTGACTTGCACAAAAAGTGTTGAAGTTGAACCTATTCTTGACATTTCTTCATTGAATCGGAATAGTTTCCCTCAAGGCTTTATCTTTGGGGCTGGTTCATCTTCCTACCAGTTCGAAGGTGCAGCAACAGAAGGTGGTAGAACACCAAGTATATGGGACACCTTTACTCATAGATATCCTGAAAAGATCAAGGATGGAAGCAATGGAGATGTAGCCATTGACACATATCACCAATACAAGGAAGATGTTAAGATCATGAAAGATATGAACTTAGATTCATACAGATTCTCCATATCCTGGTCTAGAATATTGCCAAATGGAAAGCTTAGTGGTGGTGTCAATCAAGAAGGAATCAACTATTACAATAATCTCATCAATGAGTTACTAGCTAATGGTATACAACCATTAGTGACTCTTTTCCATTGGGATCTTCCTCAAACTTTAGAAGAAGAGTATGGTGGCTTCTTAAGTCCTCTTATAGTAAAAGATTTTCAAGACTATGCGGAACTTTGTTTCAAGGAATTTGGTGATAGAGTCAAGTATTGGGTTACTTTGAACGAGCCATGGAGCTATAGCCAAAATGGCTATGCAAATGGGCGAATGGCACCGGGTCGTTGCTCCAGTTGGTTGAATCCAAATTGTACTGGCGGTGATTCTGCGATCGAGCCCTATTTGGTAACACATTACCAACTTCTTGCACATGCCGCAGCCGTTGATGTGTACAAGAAAAAGTATAAAGAATCTCAAAAGGGTGTAATAGGCATAACCTTAGTAACGAATTGGTATCTTCCACTCTCAGATTCCAAATCCGACCAAAAAGCAGCAGAAAGAGCAATTGATTTTATGTATGGATGGTTTATGGATCCACTAACATCAGGAGATTATCCCAAAAGCATGAGAGCCCTCGTTGGTTCTAGGTTACCAAAATTCAATACAATGCAAACTAAACTACTCATTGGCTCATTTGATTTTATTGGTCTAAACTATTACTCTTCAACATATGCCTCTGATGCACCATTGTTAAGCAATGCTAGACCTAGTTACTTAACAGATTCTTTGGTTAATCCAGCATTTGAGCGCAACGGGAAACCTATTGGTATTAAGATTGCTTCGGAATGGTTGTACGTTTATCCAAGAGGAATTCGTGATCTTTTGTTATACACCAAAGAAAAGTACAATAATCCTTCTATTTACATCACAGAAAATGGTATAAATGAATACGAGGATTCTACATTATCGGTTGAGGAATCACTCTTGGATACTTTTCGAATTGATTACCATTACCGTCATCTATTTTATCTTCGATCTGCCATTAGGGAAGGTGCGAATGTCAAGGGTTATTACGTATGGTCATTGTTCGACAATTTTGAATGGTCATCCGGTTATAGCGTCAGATTTGGAATGACCTTTGTTGATTATAAGAATGGCTTGAAAAGATACCAGAAGTTGTCTGCATTGTGGTTTAAGAATTTTCTCAAAAAAGAAACTAAGCTTATGTTTCTAATGAGAAAGGTTATGAGATTCATTCATTAA 1596 0.3753 MAFNNLLFLIAFVLFLSKSNIVTCTKSVEVEPILDISSLNRNSFPQGFIFGAGSSSYQFEGAATEGGRTPSIWDTFTHRYPEKIKDGSNGDVAIDTYHQYKEDVKIMKDMNLDSYRFSISWSRILPNGKLSGGVNQEGINYYNNLINELLANGIQPLVTLFHWDLPQTLEEEYGGFLSPLIVKDFQDYAELCFKEFGDRVKYWVTLNEPWSYSQNGYANGRMAPGRCSSWLNPNCTGGDSAIEPYLVTHYQLLAHAAAVDVYKKKYKESQKGVIGITLVTNWYLPLSDSKSDQKAAERAIDFMYGWFMDPLTSGDYPKSMRALVGSRLPKFNTMQTKLLIGSFDFIGLNYYSSTYASDAPLLSNARPSYLTDSLVNPAFERNGKPIGIKIASEWLYVYPRGIRDLLLYTKEKYNNPSIYITENGINEYEDSTLSVEESLLDTFRIDYHYRHLFYLRSAIREGANVKGYYVWSLFDNFEWSSGYSVRFGMTFVDYKNGLKRYQKLSALWFKNFLKKETKLMFLMRKVMRFIH* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1975 531 SUPERFAMILY (Trans)glycosidases 33 514 IPR017853 -
Mtr4g1975 531 Pfam Glycosyl hydrolase family 1 41 516 IPR001360 GO:0004553|GO:0005975
Mtr4g1975 531 PRINTS Glycosyl hydrolase family 1 signature 342 356 IPR001360 GO:0004553|GO:0005975
Mtr4g1975 531 PRINTS Glycosyl hydrolase family 1 signature 418 426 IPR001360 GO:0004553|GO:0005975
Mtr4g1975 531 PRINTS Glycosyl hydrolase family 1 signature 441 452 IPR001360 GO:0004553|GO:0005975
Mtr4g1975 531 PRINTS Glycosyl hydrolase family 1 signature 462 479 IPR001360 GO:0004553|GO:0005975
Mtr4g1975 531 PRINTS Glycosyl hydrolase family 1 signature 486 498 IPR001360 GO:0004553|GO:0005975
Mtr4g1975 531 Gene3D Glycosidases 29 515 - -
Mtr4g1975 531 PANTHER GLYCOSYL HYDROLASE 5 520 IPR001360 GO:0004553|GO:0005975
Mtr4g1975 531 PANTHER GLYCOSIDE HYDROLASE FAMILY 1 PROTEIN 5 520 - -
Mtr4g1975 531 ProSitePatterns Glycosyl hydrolases family 1 N-terminal signature. 48 62 IPR033132 -
Mtr4g1975 531 ProSitePatterns Glycosyl hydrolases family 1 active site. 418 426 IPR018120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1975 Mtr-Chr4 33301882 33304756 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1975 9 518 Glycoside Hydrolase AT5G44640 53.425 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1975 - K01188 gmx:100802250 878.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1975 4 33301882 33304756 Mtr4g1975 4 33301882 33304756 ECH